Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   AC2117_RS17875 Genome accession   NZ_LS999521
Coordinates   3732469..3733599 (+) Length   376 a.a.
NCBI ID   WP_133975851.1    Uniprot ID   A0A446ZPI2
Organism   Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3727469..3738599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC2117_RS17850 (AC2117_03540) - 3727722..3727928 (-) 207 WP_003655499.1 hypothetical protein -
  AC2117_RS17855 (AC2117_03541) - 3727984..3730098 (-) 2115 WP_133975845.1 TonB-dependent copper receptor -
  AC2117_RS17860 (AC2117_03542) - 3730172..3730597 (-) 426 WP_133975847.1 DUF2946 family protein -
  AC2117_RS17865 (AC2117_03543) def 3730641..3731171 (-) 531 WP_004795267.1 peptide deformylase -
  AC2117_RS17870 (AC2117_03544) tsaP 3731294..3732448 (+) 1155 WP_133975849.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  AC2117_RS17875 (AC2117_03545) dprA 3732469..3733599 (+) 1131 WP_133975851.1 DNA-processing protein DprA Machinery gene
  AC2117_RS17880 (AC2117_03546) - 3733651..3734220 (+) 570 WP_133975853.1 L-threonylcarbamoyladenylate synthase -
  AC2117_RS17885 (AC2117_03547) - 3734612..3735532 (-) 921 WP_133975855.1 DMT family transporter -
  AC2117_RS17890 (AC2117_03548) - 3735644..3736297 (-) 654 WP_133975858.1 TetR/AcrR family transcriptional regulator -
  AC2117_RS17895 (AC2117_03549) - 3736433..3737644 (+) 1212 WP_133975861.1 MFS transporter -
  AC2117_RS17900 (AC2117_03550) - 3737666..3738430 (+) 765 WP_133975863.1 AraC family transcriptional regulator -

Sequence

Protein


Download         Length: 376 a.a.        Molecular weight: 41878.49 Da        Isoelectric Point: 6.8139

>NTDB_id=1143514 AC2117_RS17875 WP_133975851.1 3732469..3733599(+) (dprA) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
MLTQFSSHHYHTLKVWYLVQHSLVSFKKIVDYFGTCEKATQPTGLAQWRNLGLHANHLKRVDEFQTAQGQAQFEKLVQQI
HQYTDFILTSDDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASAHQRTIAITGTGLDSTYPAQNKKLAEQILDQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQNQSELVVSSAPEIP
KHLINLYQSLDWVGQNIDQLVLHHSQPVAELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=1143514 AC2117_RS17875 WP_133975851.1 3732469..3733599(+) (dprA) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
ATGCTTACTCAATTTTCTTCACACCATTACCACACCCTTAAAGTGTGGTATTTGGTGCAGCACTCTTTGGTCAGTTTTAA
AAAAATTGTCGATTATTTTGGTACTTGTGAAAAGGCCACTCAACCTACCGGACTCGCCCAATGGCGCAATCTCGGGTTAC
ATGCCAACCATTTAAAACGTGTAGACGAATTTCAAACTGCTCAGGGTCAAGCTCAGTTTGAAAAACTGGTTCAGCAGATC
CATCAATATACTGACTTTATCTTAACCTCAGATGACTCTGGCTATCCTACGCAATTGCTACCTTACACAGACCATCCGCC
CATCATTTTTGGGAAAGGCCAAGCTCAAGCTTTGTTGCAACCACAAATTGCTATTGTGGGTAGTCGAAAACCAAGTCCTC
ATGGCCGTCAAGTTGCTTATGATTTTGCGTATTACTTAAGTGAAAAAGGATTTTATGTAAGTAGTGGTTTGGCATATGGC
ATTGATGAGGCTGCCCATCAAGGAGCCTCAGCTCATCAAAGGACTATTGCTATAACAGGAACAGGTTTAGATAGTACCTA
CCCTGCTCAAAATAAAAAACTTGCAGAGCAGATCTTGGATCAAAACGGCGCCATCATTACTGAGTTTTTGCCCGGTACGC
CGCCTTTACAACAGCATTTCCCTCGTAGAAACCGAATTGTCAGTGGTCTAAGTTTAGGCGTGTTAGTGGTAGAAGCGACT
TTAAAAAGTGGCTCACTGATTACTGCCAACAAAGCTGCCGAGCAAGGTAAAACGGTATTTGCTATTCCCGGTCATATTTA
TAGTGAGTTTCATCAAGGGTGCCATCAGCTCATTCGCGAGGGGGCTATTTTAGTCGATCATCCTGAACAGATTATTGAAG
ATTTAGCCCTTCCTACCCAATGGCAAAGCCAACAGCAAAACCAAAGTGAGCTAGTTGTTTCTTCTGCACCAGAAATTCCG
AAACATTTAATTAATCTTTATCAATCTTTAGACTGGGTCGGCCAAAATATTGACCAGCTTGTTTTGCACCATTCACAGCC
TGTTGCAGAACTCACCTCTTCACTCATGGAACTAGAACTACTGGGTTTATGTATGCAACAATCTGGACTGTATTTACGTT
GTCGTTCTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(86-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A446ZPI2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

90.691

100

0.907
  dprA Acinetobacter baumannii strain A118

90.16

100

0.902
  dprA Acinetobacter baylyi ADP1

69.816

100

0.707
  dprA Vibrio cholerae strain A1552

43.544

88.564

0.386

Multiple sequence alignment