Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   AC2117_RS15765 Genome accession   NZ_LS999521
Coordinates   3291104..3291502 (-) Length   132 a.a.
NCBI ID   WP_133975336.1    Uniprot ID   A0A446ZMZ7
Organism   Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3286104..3296502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC2117_RS15735 (AC2117_03120) - 3286186..3286455 (-) 270 WP_042894989.1 HPr family phosphocarrier protein -
  AC2117_RS15740 (AC2117_03121) rapZ 3286452..3287303 (-) 852 WP_042894987.1 RNase adapter RapZ -
  AC2117_RS15745 (AC2117_03122) panC 3287328..3288176 (-) 849 WP_133975330.1 pantoate--beta-alanine ligase -
  AC2117_RS15750 (AC2117_03123) panB 3288180..3288989 (-) 810 WP_003655024.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  AC2117_RS15755 (AC2117_03124) folK 3289036..3289518 (-) 483 WP_133975332.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  AC2117_RS15760 (AC2117_03125) pcnB 3289515..3290978 (-) 1464 WP_133975334.1 polynucleotide adenylyltransferase PcnB -
  AC2117_RS15765 (AC2117_03126) comEA 3291104..3291502 (-) 399 WP_133975336.1 ComEA family DNA-binding protein Machinery gene
  AC2117_RS15770 (AC2117_03127) mazG 3291471..3292277 (-) 807 WP_133975338.1 nucleoside triphosphate pyrophosphohydrolase -
  AC2117_RS15775 (AC2117_03128) - 3292390..3293163 (+) 774 WP_133975340.1 SDR family oxidoreductase -
  AC2117_RS15780 (AC2117_03129) - 3293211..3295517 (-) 2307 WP_133975342.1 RelA/SpoT family protein -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 15139.38 Da        Isoelectric Point: 10.4153

>NTDB_id=1143500 AC2117_RS15765 WP_133975336.1 3291104..3291502(-) (comEA) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
MQLSMNLSKSKYFIILFWSLISSTFIQAQSFDQNFKEWKAKQQMYDQKLSMQQSSHSNVSKSTIMTDSSGQVHLNQANID
ELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPAIFEKNKPRLSL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1143500 AC2117_RS15765 WP_133975336.1 3291104..3291502(-) (comEA) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
ATGCAACTCAGCATGAATCTTTCGAAGAGTAAGTATTTTATTATTTTATTTTGGAGCCTGATTTCATCAACCTTTATTCA
GGCTCAATCTTTCGATCAAAATTTTAAGGAGTGGAAAGCTAAACAGCAGATGTATGATCAGAAGTTGAGCATGCAGCAAT
CATCTCATTCTAATGTCTCAAAAAGTACTATAATGACTGATTCTTCAGGGCAAGTTCACTTGAATCAAGCTAATATTGAT
GAGCTTCAAAAGCTAAAAGGTATCGGTGAGAAAAAGGCTCAAGCGATTGTGGAATACCGTCAAAAGAATGGTGGCTTTAA
AAATATTGATGAATTTAAAAATGTAAAAGGTATTGGTCCAGCCATTTTTGAAAAGAATAAACCACGGTTGAGTTTATAA

Domains


Predicted by InterproScan.

(69-130)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A446ZMZ7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

67.647

100

0.697

  comEA Acinetobacter baumannii D1279779

67.647

100

0.697

  comEA Acinetobacter baylyi ADP1

42.063

95.455

0.402


Multiple sequence alignment