Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AC2117_RS01005 | Genome accession | NZ_LS999521 |
| Coordinates | 223624..224220 (+) | Length | 198 a.a. |
| NCBI ID | WP_133971318.1 | Uniprot ID | A0A446ZF29 |
| Organism | Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 218624..229220
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC2117_RS00980 (AC2117_00193) | - | 218696..219499 (-) | 804 | WP_133971308.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| AC2117_RS00985 (AC2117_00194) | - | 219603..219974 (-) | 372 | WP_133971310.1 | MerR family transcriptional regulator | - |
| AC2117_RS00990 (AC2117_00195) | tenA | 220041..220715 (-) | 675 | WP_133971312.1 | thiaminase II | - |
| AC2117_RS00995 (AC2117_00196) | - | 220978..222060 (+) | 1083 | WP_133971314.1 | DUF475 domain-containing protein | - |
| AC2117_RS01000 (AC2117_00197) | - | 222208..223572 (+) | 1365 | WP_133971316.1 | MFS transporter | - |
| AC2117_RS01005 (AC2117_00198) | ssb | 223624..224220 (+) | 597 | WP_133971318.1 | single-stranded DNA-binding protein | Machinery gene |
| AC2117_RS01010 (AC2117_00199) | - | 224376..225602 (+) | 1227 | WP_133971320.1 | site-specific integrase | - |
| AC2117_RS01015 (AC2117_00200) | - | 225595..227151 (+) | 1557 | WP_133971322.1 | site-specific integrase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21466.22 Da Isoelectric Point: 6.4832
>NTDB_id=1143470 AC2117_RS01005 WP_133971318.1 223624..224220(+) (ssb) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKTSGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDGRQQGEQGLAGGNDFNQPRFNAPQQGGNGYQNNNNQGGGYNQNSGGGYGSN
PAGFGNGGNSNPQSGGFAPKASQQPASAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKTSGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDGRQQGEQGLAGGNDFNQPRFNAPQQGGNGYQNNNNQGGGYNQNSGGGYGSN
PAGFGNGGNSNPQSGGFAPKASQQPASAPADLDDDLPF
Nucleotide
Download Length: 597 bp
>NTDB_id=1143470 AC2117_RS01005 WP_133971318.1 223624..224220(+) (ssb) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACTCAATTTTCAATCGCGACAAGTGAAGCTTGGACCGATAAAACTTCGGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATTGAAGGT
TCATTACGTACGCGTCAGTGGACTGATCAAAATGGCCAAGAGCGCTATACAACAGAAATTCGTGGCGAACAGATGCAAAT
GTTAGATGGTCGTCAACAAGGTGAACAAGGTCTCGCTGGCGGTAATGATTTTAATCAACCGCGTTTTAACGCACCTCAAC
AAGGTGGCAATGGTTATCAAAATAATAATAACCAAGGCGGTGGTTATAACCAAAATAGTGGTGGCGGCTATGGCAGTAAC
CCAGCTGGTTTTGGTAATGGTGGAAACAGTAACCCACAATCTGGTGGTTTTGCTCCAAAAGCTTCACAACAGCCTGCGTC
TGCACCAGCTGATTTAGACGACGATTTACCGTTCTGA
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACTCAATTTTCAATCGCGACAAGTGAAGCTTGGACCGATAAAACTTCGGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATTGAAGGT
TCATTACGTACGCGTCAGTGGACTGATCAAAATGGCCAAGAGCGCTATACAACAGAAATTCGTGGCGAACAGATGCAAAT
GTTAGATGGTCGTCAACAAGGTGAACAAGGTCTCGCTGGCGGTAATGATTTTAATCAACCGCGTTTTAACGCACCTCAAC
AAGGTGGCAATGGTTATCAAAATAATAATAACCAAGGCGGTGGTTATAACCAAAATAGTGGTGGCGGCTATGGCAGTAAC
CCAGCTGGTTTTGGTAATGGTGGAAACAGTAACCCACAATCTGGTGGTTTTGCTCCAAAAGCTTCACAACAGCCTGCGTC
TGCACCAGCTGATTTAGACGACGATTTACCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
48.815 |
100 |
0.52 |
| ssb | Vibrio cholerae strain A1552 |
43.842 |
100 |
0.449 |
| ssb | Neisseria gonorrhoeae MS11 |
36.408 |
100 |
0.379 |
| ssb | Neisseria meningitidis MC58 |
37.755 |
98.99 |
0.374 |