Detailed information NTG1142982

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DQL00_RS09090
• Genome accession: NZ_LS483523
• Coordinates: 1704589..1705542 (-)
• Length: 317 a.a.
• NCBI ID: WP_000495910.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 4041STDY6836169
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1699589..1710542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL00_RS09060	-	1700079..1700174 (-)	96	Protein_1672	IS630 family transposase	-
DQL00_RS09070	-	1700597..1700926 (+)	330	Protein_1673	transposase	-
DQL00_RS09075	prsA	1701045..1701986 (-)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
DQL00_RS09080	-	1702053..1702766 (-)	714	WP_001812425.1	O-methyltransferase	-
DQL00_RS09085	pepF	1702768..1704570 (-)	1803	WP_023396243.1	oligoendopeptidase F	Regulator
DQL00_RS09090	coiA	1704589..1705542 (-)	954	WP_000495910.1	competence protein CoiA	Machinery gene
DQL00_RS09095	tehB	1705615..1706475 (-)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
DQL00_RS09100	smpB	1706491..1706958 (-)	468	WP_001051750.1	SsrA-binding protein SmpB	-
DQL00_RS09105	rnr	1706921..1709275 (-)	2355	WP_000654893.1	ribonuclease R	-
DQL00_RS09110	secG	1709377..1709610 (-)	234	WP_000282517.1	preprotein translocase subunit SecG	-
DQL00_RS09115	rpmG	1709650..1709799 (-)	150	WP_001809104.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38269.90 Da
• Isoelectric Point: 8.9763

>NTDB_id=1142982 DQL00_RS09090 WP_000495910.1 1704589..1705542(-) (coiA) [Streptococcus pneumoniae strain 4041STDY6836169]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQYFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=1142982 DQL00_RS09090 WP_000495910.1 1704589..1705542(-) (coiA) [Streptococcus pneumoniae strain 4041STDY6836169]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGATATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGTACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	89.59	100	0.896
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435