Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DQN68_RS01740 | Genome accession | NZ_LS483522 |
| Coordinates | 318413..318904 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain NCTC8224 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 313413..323904
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN68_RS01710 (NCTC8224_00337) | - | 314697..315197 (+) | 501 | WP_028797158.1 | phosphatase PAP2 family protein | - |
| DQN68_RS01715 (NCTC8224_00338) | trxA | 315260..315592 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| DQN68_RS01720 (NCTC8224_00339) | - | 315644..316237 (-) | 594 | WP_023079969.1 | helix-turn-helix domain-containing protein | - |
| DQN68_RS01725 (NCTC8224_00340) | mutY | 316313..317467 (-) | 1155 | WP_002988276.1 | A/G-specific adenine glycosylase | - |
| DQN68_RS01730 (NCTC8224_00341) | - | 317635..317928 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| DQN68_RS01735 (NCTC8224_00342) | rpsF | 318101..318391 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| DQN68_RS01740 (NCTC8224_00343) | ssb | 318413..318904 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| DQN68_RS01745 (NCTC8224_00344) | rpsR | 319069..319308 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| DQN68_RS01750 (NCTC8224_00345) | - | 319441..320097 (-) | 657 | WP_010922629.1 | DUF1129 domain-containing protein | - |
| DQN68_RS01755 (NCTC8224_00346) | - | 320230..321174 (-) | 945 | WP_011888617.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=1142878 DQN68_RS01740 WP_002983122.1 318413..318904(+) (ssb) [Streptococcus pyogenes strain NCTC8224]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1142878 DQN68_RS01740 WP_002983122.1 318413..318904(+) (ssb) [Streptococcus pyogenes strain NCTC8224]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |