Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | DQN30_RS03705 | Genome accession | NZ_LS483458 |
| Coordinates | 725832..726179 (+) | Length | 115 a.a. |
| NCBI ID | WP_172454024.1 | Uniprot ID | A0A2X4R1A7 |
| Organism | Haemophilus haemolyticus strain NCTC10839 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 720832..731179
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN30_RS03690 (NCTC10839_00726) | - | 722579..724135 (+) | 1557 | WP_172454023.1 | phosphoethanolamine transferase | - |
| DQN30_RS03695 (NCTC10839_00727) | lspA | 724205..724720 (+) | 516 | WP_111696342.1 | signal peptidase II | - |
| DQN30_RS03700 (NCTC10839_00728) | ispH | 724717..725661 (+) | 945 | WP_111696343.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| DQN30_RS03705 (NCTC10839_00729) | comE1/comEA | 725832..726179 (+) | 348 | WP_172454024.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| DQN30_RS03710 (NCTC10839_00730) | - | 726208..726585 (-) | 378 | WP_046942448.1 | DUF305 domain-containing protein | - |
| DQN30_RS03715 (NCTC10839_00731) | - | 726693..726935 (+) | 243 | WP_106013894.1 | hypothetical protein | - |
| DQN30_RS03720 (NCTC10839_00733) | thiB | 727113..728111 (+) | 999 | WP_111696344.1 | thiamine ABC transporter substrate binding subunit | - |
| DQN30_RS03725 (NCTC10839_00734) | thiP | 728116..729732 (+) | 1617 | WP_111696345.1 | thiamine/thiamine pyrophosphate ABC transporter permease | - |
| DQN30_RS03730 (NCTC10839_00735) | thiQ | 729716..730363 (+) | 648 | WP_111696346.1 | thiamine ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 115 a.a. Molecular weight: 12372.17 Da Isoelectric Point: 8.0102
>NTDB_id=1142192 DQN30_RS03705 WP_172454024.1 725832..726179(+) (comE1/comEA) [Haemophilus haemolyticus strain NCTC10839]
MKLMKTLFTSMVLCGALVASSSFAEEKATEQTAQPVVATQTEAQVAPATVSDKLNINTATVSEIQKALTGIGAKKAEAIV
QYREKHGNFTSAEQLLEVQGIGKATLERNRDRITF
MKLMKTLFTSMVLCGALVASSSFAEEKATEQTAQPVVATQTEAQVAPATVSDKLNINTATVSEIQKALTGIGAKKAEAIV
QYREKHGNFTSAEQLLEVQGIGKATLERNRDRITF
Nucleotide
Download Length: 348 bp
>NTDB_id=1142192 DQN30_RS03705 WP_172454024.1 725832..726179(+) (comE1/comEA) [Haemophilus haemolyticus strain NCTC10839]
ATGAAATTAATGAAAACATTATTTACTTCGATGGTATTGTGTGGTGCGCTTGTTGCTTCTTCGTCTTTTGCTGAGGAAAA
AGCAACAGAACAAACCGCTCAACCTGTTGTGGCAACTCAAACTGAAGCTCAAGTTGCACCAGCTACTGTGAGTGATAAAT
TGAATATCAATACGGCAACCGTTAGTGAAATTCAAAAAGCCTTAACAGGAATCGGTGCAAAAAAAGCAGAAGCGATAGTG
CAATATCGTGAAAAACACGGTAATTTCACGAGTGCTGAACAACTATTAGAAGTGCAAGGGATTGGTAAAGCAACACTTGA
AAGAAACCGTGATCGAATCACTTTTTAA
ATGAAATTAATGAAAACATTATTTACTTCGATGGTATTGTGTGGTGCGCTTGTTGCTTCTTCGTCTTTTGCTGAGGAAAA
AGCAACAGAACAAACCGCTCAACCTGTTGTGGCAACTCAAACTGAAGCTCAAGTTGCACCAGCTACTGTGAGTGATAAAT
TGAATATCAATACGGCAACCGTTAGTGAAATTCAAAAAGCCTTAACAGGAATCGGTGCAAAAAAAGCAGAAGCGATAGTG
CAATATCGTGAAAAACACGGTAATTTCACGAGTGCTGAACAACTATTAGAAGTGCAAGGGATTGGTAAAGCAACACTTGA
AAGAAACCGTGATCGAATCACTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
88.393 |
97.391 |
0.861 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
57.895 |
99.13 |
0.574 |
| comEA | Vibrio campbellii strain DS40M4 |
39.091 |
95.652 |
0.374 |