Detailed information NTG1142054

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DQL01_RS05140
• Genome accession: NZ_LS483451
• Coordinates: 953389..954342 (+)
• Length: 317 a.a.
• NCBI ID: WP_111702545.1
• Uniprot ID: A0AAQ3A197
• Organism: Streptococcus pneumoniae strain 4041STDY6836166
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 948389..959342

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL01_RS05115	rpmG	949132..949281 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
DQL01_RS05120	secG	949321..949554 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
DQL01_RS05125	rnr	949656..952010 (+)	2355	WP_111702544.1	ribonuclease R	-
DQL01_RS05130	smpB	951973..952440 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
DQL01_RS05135	tehB	952456..953316 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
DQL01_RS05140	coiA	953389..954342 (+)	954	WP_111702545.1	competence protein CoiA	Machinery gene
DQL01_RS05145	pepF	954361..956163 (+)	1803	WP_000244144.1	oligoendopeptidase F	Regulator
DQL01_RS05150	-	956165..956878 (+)	714	WP_079066636.1	O-methyltransferase	-
DQL01_RS05155	prsA	956945..957886 (+)	942	WP_061649729.1	peptidylprolyl isomerase PrsA	-
DQL01_RS05160	-	958005..958346 (-)	342	Protein_979	transposase	-
DQL01_RS05170	-	958759..958854 (+)	96	Protein_980	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38273.89 Da
• Isoelectric Point: 8.9865

>NTDB_id=1142054 DQL01_RS05140 WP_111702545.1 953389..954342(+) (coiA) [Streptococcus pneumoniae strain 4041STDY6836166]
MFVARDTRGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=1142054 DQL01_RS05140 WP_111702545.1 953389..954342(+) (coiA) [Streptococcus pneumoniae strain 4041STDY6836166]
ATGTTTGTTGCGAGAGATACTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.369	100	0.994
coiA	Streptococcus pneumoniae Rx1	98.738	100	0.987
coiA	Streptococcus pneumoniae D39	98.738	100	0.987
coiA	Streptococcus pneumoniae R6	98.738	100	0.987
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432