Detailed information NTG1141857

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: DQK99_RS10590
• Genome accession: NZ_LS483448
• Coordinates: 1922832..1923293 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250531.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 4041STDY6836167
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1917832..1928293

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQK99_RS10560	-	1918139..1918963 (-)	825	WP_000727904.1	membrane protein insertase YidC	-
DQK99_RS10565	rnpA	1918938..1919309 (-)	372	WP_000739246.1	ribonuclease P protein component	-
DQK99_RS12585	-	1919326..1919457 (-)	132	WP_000768904.1	hypothetical protein	-
DQK99_RS10570	-	1919458..1920648 (-)	1191	WP_000167765.1	acetate kinase	-
DQK99_RS10575	comYH	1920699..1921652 (-)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
DQK99_RS10580	-	1921713..1922305 (-)	593	Protein_1971	class I SAM-dependent methyltransferase	-
DQK99_RS10585	comGG/cglG	1922408..1922854 (-)	447	WP_001809944.1	competence type IV pilus minor pilin ComGG	Machinery gene
DQK99_RS10590	comGF/cglF	1922832..1923293 (-)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
DQK99_RS10595	comGE/cglE	1923256..1923558 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
DQK99_RS10600	comGD/cglD	1923521..1923955 (-)	435	WP_033606693.1	competence type IV pilus minor pilin ComGD	Machinery gene
DQK99_RS10605	comGC/cglC	1923918..1924241 (-)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
DQK99_RS10610	comGB/cglB	1924243..1925259 (-)	1017	WP_078130737.1	competence type IV pilus assembly protein ComGB	Machinery gene
DQK99_RS10615	comGA/cglA/cilD	1925207..1926148 (-)	942	WP_000249536.1	competence type IV pilus ATPase ComGA	Machinery gene
DQK99_RS10620	-	1926224..1926589 (-)	366	WP_000286415.1	DUF1033 family protein	-
DQK99_RS10625	-	1926740..1927798 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17849.37 Da
• Isoelectric Point: 6.4832

>NTDB_id=1141857 DQK99_RS10590 WP_000250531.1 1922832..1923293(-) (comGF/cglF) [Streptococcus pneumoniae strain 4041STDY6836167]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEVELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=1141857 DQK99_RS10590 WP_000250531.1 1922832..1923293(-) (comGF/cglF) [Streptococcus pneumoniae strain 4041STDY6836167]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGTAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	95.425	100	0.954
comGF/cglF	Streptococcus pneumoniae D39	95.425	100	0.954
comGF/cglF	Streptococcus pneumoniae R6	95.425	100	0.954
comGF/cglF	Streptococcus pneumoniae TIGR4	95.425	100	0.954
comGF/cglF	Streptococcus mitis SK321	92.81	100	0.928
comGF/cglF	Streptococcus mitis NCTC 12261	91.503	100	0.915