Detailed information NTG1141821

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DQK99_RS05005
• Genome accession: NZ_LS483448
• Coordinates: 922872..923825 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495896.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 4041STDY6836167
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 917872..928825

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQK99_RS04980	rpmG	918615..918764 (+)	150	WP_001810029.1	50S ribosomal protein L33	-
DQK99_RS04985	secG	918804..919037 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
DQK99_RS04990	rnr	919139..921493 (+)	2355	WP_000654871.1	ribonuclease R	-
DQK99_RS04995	smpB	921456..921923 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
DQK99_RS05000	tehB	921939..922799 (+)	861	WP_000413762.1	SAM-dependent methyltransferase TehB	-
DQK99_RS05005	coiA	922872..923825 (+)	954	WP_000495896.1	competence protein CoiA	Machinery gene
DQK99_RS05010	pepF	923844..925646 (+)	1803	WP_000244124.1	oligoendopeptidase F	Regulator
DQK99_RS05015	-	925648..926361 (+)	714	WP_001810028.1	O-methyltransferase	-
DQK99_RS05020	prsA	926428..927369 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
DQK99_RS05025	-	927488..927829 (-)	342	Protein_958	transposase	-
DQK99_RS05035	-	928241..928336 (+)	96	Protein_959	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=1141821 DQK99_RS05005 WP_000495896.1 922872..923825(+) (coiA) [Streptococcus pneumoniae strain 4041STDY6836167]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHIANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=1141821 DQK99_RS05005 WP_000495896.1 922872..923825(+) (coiA) [Streptococcus pneumoniae strain 4041STDY6836167]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACATAGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.369	100	0.994
coiA	Streptococcus pneumoniae Rx1	98.738	100	0.987
coiA	Streptococcus pneumoniae D39	98.738	100	0.987
coiA	Streptococcus pneumoniae R6	98.738	100	0.987
coiA	Streptococcus mitis NCTC 12261	88.644	100	0.886
coiA	Lactococcus lactis subsp. cremoris KW2	41.975	100	0.429