Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | DQN58_RS03725 | Genome accession | NZ_LS483443 |
| Coordinates | 720079..721194 (-) | Length | 371 a.a. |
| NCBI ID | WP_006716788.1 | Uniprot ID | - |
| Organism | Aggregatibacter segnis ATCC 33393 strain NCTC 10977 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 715079..726194
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN58_RS03695 (NCTC10977_00741) | yggU | 715477..715770 (+) | 294 | WP_006716776.1 | DUF167 family protein YggU | - |
| DQN58_RS03700 (NCTC10977_00742) | - | 715888..716547 (+) | 660 | WP_006716778.1 | NAD(P)H-dependent oxidoreductase | - |
| DQN58_RS03705 (NCTC10977_00743) | - | 716616..718589 (+) | 1974 | WP_006716780.1 | LTA synthase family protein | - |
| DQN58_RS03710 (NCTC10977_00744) | - | 718822..719112 (+) | 291 | WP_006716782.1 | hypothetical protein | - |
| DQN58_RS03715 (NCTC10977_00745) | - | 719268..719858 (+) | 591 | WP_081456141.1 | sigma-70 family RNA polymerase sigma factor | - |
| DQN58_RS03725 (NCTC10977_00747) | dprA | 720079..721194 (-) | 1116 | WP_006716788.1 | DNA-processing protein DprA | Machinery gene |
| DQN58_RS03730 (NCTC10977_00748) | rplI | 721407..721856 (-) | 450 | WP_006716790.1 | 50S ribosomal protein L9 | - |
| DQN58_RS03735 (NCTC10977_00749) | rpsR | 721872..722102 (-) | 231 | WP_005541294.1 | 30S ribosomal protein S18 | - |
| DQN58_RS03740 (NCTC10977_00750) | priB | 722115..722441 (-) | 327 | WP_006716817.1 | primosomal replication protein N | - |
| DQN58_RS03745 (NCTC10977_00751) | rpsF | 722428..722805 (-) | 378 | WP_005555822.1 | 30S ribosomal protein S6 | - |
| DQN58_RS03750 (NCTC10977_00752) | lexA | 722957..723580 (-) | 624 | WP_006716824.1 | transcriptional repressor LexA | - |
Sequence
Protein
Download Length: 371 a.a. Molecular weight: 41799.69 Da Isoelectric Point: 5.7676
>NTDB_id=1141693 DQN58_RS03725 WP_006716788.1 720079..721194(-) (dprA) [Aggregatibacter segnis ATCC 33393 strain NCTC 10977]
MNNHLPLFLRLLQIPKLGPTSIQKILDQVNLSDLQDYDVTAFKHIGWNAQQIQAWFNPEKRYIEPALLWGEKEGNHILDY
YHPDYPQQLKQIDSAPPVLFVKGETSTLSHPQIAIVGSRQCSSYGEYWAKYFASELTTNGFIITSGLALGIDGFCHQAAV
DLRQPTIAVLGSGLEEVYPAKHRKLAQHIIEQGGALVSEFFPLQPPIAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQNREIFALPGNIQSQFSQGCHKLIKQGAMLVENVEDILENLAPQMAWEKHLKNRPHFSSPTVISPQQEEKVSPTY
PELYQAIGYTPISIDSLSSTLNLSVEQLLIQLLELELQELIYSENGLYRRT
MNNHLPLFLRLLQIPKLGPTSIQKILDQVNLSDLQDYDVTAFKHIGWNAQQIQAWFNPEKRYIEPALLWGEKEGNHILDY
YHPDYPQQLKQIDSAPPVLFVKGETSTLSHPQIAIVGSRQCSSYGEYWAKYFASELTTNGFIITSGLALGIDGFCHQAAV
DLRQPTIAVLGSGLEEVYPAKHRKLAQHIIEQGGALVSEFFPLQPPIAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQNREIFALPGNIQSQFSQGCHKLIKQGAMLVENVEDILENLAPQMAWEKHLKNRPHFSSPTVISPQQEEKVSPTY
PELYQAIGYTPISIDSLSSTLNLSVEQLLIQLLELELQELIYSENGLYRRT
Nucleotide
Download Length: 1116 bp
>NTDB_id=1141693 DQN58_RS03725 WP_006716788.1 720079..721194(-) (dprA) [Aggregatibacter segnis ATCC 33393 strain NCTC 10977]
ATGAACAACCATTTACCCCTTTTCCTTCGCCTATTACAAATTCCTAAACTAGGCCCAACCTCAATTCAAAAAATACTTGA
TCAAGTAAATTTATCTGATTTACAAGATTACGATGTTACCGCATTCAAACATATAGGGTGGAATGCTCAACAAATCCAAG
CGTGGTTCAATCCTGAAAAACGCTATATTGAACCGGCACTTTTATGGGGAGAAAAAGAAGGAAATCATATTCTTGATTAT
TATCATCCGGACTATCCTCAGCAATTAAAACAAATTGACAGCGCACCACCAGTGTTATTCGTCAAAGGTGAAACATCCAC
CTTATCTCACCCACAGATTGCTATCGTTGGCAGTCGCCAATGTTCTAGTTATGGGGAATACTGGGCAAAGTATTTTGCCT
CAGAATTAACCACCAACGGCTTCATCATAACCAGCGGACTTGCGCTGGGCATTGACGGATTCTGTCATCAAGCAGCAGTA
GATTTGAGACAGCCGACTATCGCGGTATTAGGGAGTGGCTTAGAAGAGGTTTATCCGGCAAAACACCGTAAATTGGCACA
ACATATCATTGAACAAGGTGGTGCGTTAGTTTCTGAGTTTTTCCCGTTACAACCTCCTATCGCAGAAAACTTTCCCCGCC
GTAATCGCATTATCAGCGGATTATCTCTCGCGACATTAATTATCGAAGCCACCGAACGTAGCGGATCTTTAATCACCGCT
CGTTATGCACTGGAACAAAACCGAGAAATTTTTGCTCTACCCGGCAATATCCAAAGTCAATTTAGCCAAGGCTGTCATAA
ACTTATTAAACAAGGCGCGATGCTAGTAGAAAATGTAGAAGATATTTTAGAAAACCTTGCACCACAAATGGCATGGGAAA
AACACCTGAAAAATAGACCGCACTTTTCTTCCCCAACGGTCATTTCTCCGCAACAAGAGGAAAAGGTATCGCCTACTTAT
CCTGAACTTTATCAAGCGATTGGGTATACGCCAATCAGCATTGATTCCCTCTCTAGCACACTCAATTTGTCGGTGGAGCA
ACTTCTTATTCAGCTTTTAGAATTAGAACTTCAAGAACTGATTTACAGTGAAAACGGGTTATACCGCCGCACTTAA
ATGAACAACCATTTACCCCTTTTCCTTCGCCTATTACAAATTCCTAAACTAGGCCCAACCTCAATTCAAAAAATACTTGA
TCAAGTAAATTTATCTGATTTACAAGATTACGATGTTACCGCATTCAAACATATAGGGTGGAATGCTCAACAAATCCAAG
CGTGGTTCAATCCTGAAAAACGCTATATTGAACCGGCACTTTTATGGGGAGAAAAAGAAGGAAATCATATTCTTGATTAT
TATCATCCGGACTATCCTCAGCAATTAAAACAAATTGACAGCGCACCACCAGTGTTATTCGTCAAAGGTGAAACATCCAC
CTTATCTCACCCACAGATTGCTATCGTTGGCAGTCGCCAATGTTCTAGTTATGGGGAATACTGGGCAAAGTATTTTGCCT
CAGAATTAACCACCAACGGCTTCATCATAACCAGCGGACTTGCGCTGGGCATTGACGGATTCTGTCATCAAGCAGCAGTA
GATTTGAGACAGCCGACTATCGCGGTATTAGGGAGTGGCTTAGAAGAGGTTTATCCGGCAAAACACCGTAAATTGGCACA
ACATATCATTGAACAAGGTGGTGCGTTAGTTTCTGAGTTTTTCCCGTTACAACCTCCTATCGCAGAAAACTTTCCCCGCC
GTAATCGCATTATCAGCGGATTATCTCTCGCGACATTAATTATCGAAGCCACCGAACGTAGCGGATCTTTAATCACCGCT
CGTTATGCACTGGAACAAAACCGAGAAATTTTTGCTCTACCCGGCAATATCCAAAGTCAATTTAGCCAAGGCTGTCATAA
ACTTATTAAACAAGGCGCGATGCTAGTAGAAAATGTAGAAGATATTTTAGAAAACCTTGCACCACAAATGGCATGGGAAA
AACACCTGAAAAATAGACCGCACTTTTCTTCCCCAACGGTCATTTCTCCGCAACAAGAGGAAAAGGTATCGCCTACTTAT
CCTGAACTTTATCAAGCGATTGGGTATACGCCAATCAGCATTGATTCCCTCTCTAGCACACTCAATTTGTCGGTGGAGCA
ACTTCTTATTCAGCTTTTAGAATTAGAACTTCAAGAACTGATTTACAGTGAAAACGGGTTATACCGCCGCACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Haemophilus influenzae Rd KW20 |
59.786 |
100 |
0.601 |
| dprA | Glaesserella parasuis strain SC1401 |
55.241 |
95.148 |
0.526 |
| dprA | Vibrio campbellii strain DS40M4 |
44.959 |
98.922 |
0.445 |
| dprA | Vibrio cholerae strain A1552 |
42.703 |
99.73 |
0.426 |
| dprA | Legionella pneumophila strain ERS1305867 |
40.957 |
100 |
0.415 |