Detailed information NTG1141435

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DQN42_RS03035
• Genome accession: NZ_LS483436
• Coordinates: 593245..594276 (+)
• Length: 343 a.a.
• NCBI ID: WP_004233761.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain NCTC11324
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 588245..599276

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN42_RS03010 (NCTC11324_00612)	-	588553..588867 (+)	315	WP_003073302.1	PTS cellobiose transporter subunit IIB	-
DQN42_RS03015 (NCTC11324_00613)	-	588923..590914 (+)	1992	WP_004233830.1	transcription antiterminator	-
DQN42_RS03020 (NCTC11324_00614)	-	590927..591244 (+)	318	WP_003073299.1	PTS cellobiose transporter subunit IIA	-
DQN42_RS03025 (NCTC11324_00615)	-	591267..591773 (+)	507	WP_014829609.1	hypothetical protein	-
DQN42_RS03030 (NCTC11324_00616)	celB	591813..593156 (+)	1344	WP_004233785.1	PTS cellobiose transporter subunit IIC	-
DQN42_RS03035 (NCTC11324_00617)	coiA	593245..594276 (+)	1032	WP_004233761.1	competence protein CoiA	Machinery gene
DQN42_RS03040 (NCTC11324_00618)	pepF	594228..596030 (+)	1803	WP_004233938.1	oligoendopeptidase F	Regulator
DQN42_RS03045 (NCTC11324_00619)	-	596032..596715 (+)	684	WP_003073289.1	O-methyltransferase	-
DQN42_RS03050 (NCTC11324_00620)	prsA	596822..597760 (+)	939	WP_003073287.1	peptidylprolyl isomerase PrsA	-
DQN42_RS03055 (NCTC11324_00622)	-	597985..598470 (+)	486	WP_003073285.1	LURP-one-related/scramblase family protein	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 40432.81 Da
• Isoelectric Point: 9.4284

>NTDB_id=1141435 DQN42_RS03035 WP_004233761.1 593245..594276(+) (coiA) [Streptococcus intermedius strain NCTC11324]
MLIACQENGNLLNAVEDTVNPLDKFLCPACLEAVRFKKGRIMRPHFAHISLKDCHFYTENESAEHLNLKAALFTWARKSN
HAVQVEAYLPKLQQIADLLVEKQIALEVQCSSLSQKRLKERTDSYHQHGYHVLWLLGKKLWLKDSLTNLQKNFLYFSQNM
GFYLWELDDKKQELRLKYLIHEDLHGRAQYKVQSFPFGQGSLLTVLRTPFQRQEMTSFLAKEDKNICRYVRQQLYYQQPK
WMKLQAELYQAGDNLLTKTASDFYPQVHPVCASSFCQIFQDLTPYYQQFSAYYKKAKNKNLQVLYPPIFYAKIFGSIYDR
IGKTEEILWQNKEMKLKKNILGI

Nucleotide

• Length: 1032 bp

>NTDB_id=1141435 DQN42_RS03035 WP_004233761.1 593245..594276(+) (coiA) [Streptococcus intermedius strain NCTC11324]
ATGTTAATAGCTTGTCAGGAAAATGGGAACCTACTAAATGCTGTGGAAGATACGGTAAATCCGCTGGATAAATTTCTCTG
TCCAGCTTGTTTGGAGGCGGTCCGTTTTAAAAAAGGAAGAATCATGCGACCGCATTTTGCTCATATTTCTTTAAAAGACT
GTCATTTTTATACGGAAAATGAAAGCGCAGAACACTTGAATTTGAAAGCTGCCTTGTTTACTTGGGCCAGAAAGTCTAAT
CATGCAGTTCAAGTGGAAGCGTATTTACCTAAATTGCAACAAATTGCAGATCTGTTAGTAGAGAAACAGATTGCGCTTGA
AGTTCAATGCAGTTCACTGAGTCAAAAGCGCTTAAAAGAGCGTACAGACAGTTATCATCAACATGGTTATCATGTTCTTT
GGCTATTAGGAAAGAAACTTTGGCTGAAAGATTCTTTAACTAATTTGCAAAAAAATTTTCTCTATTTCAGTCAAAATATG
GGCTTTTATTTATGGGAATTGGATGATAAAAAGCAGGAGCTTCGGCTCAAGTATCTGATTCACGAAGATTTGCATGGCCG
AGCTCAATATAAGGTCCAGTCTTTTCCTTTTGGTCAGGGCAGCCTTTTGACTGTTCTGCGAACGCCCTTTCAACGGCAGG
AGATGACCAGTTTTCTAGCGAAAGAGGATAAAAATATTTGCCGTTATGTTCGTCAACAGCTCTATTATCAACAACCTAAA
TGGATGAAATTACAGGCAGAACTGTATCAAGCAGGTGATAATTTATTAACCAAAACGGCTAGTGACTTTTATCCGCAGGT
TCATCCGGTTTGTGCCAGCTCTTTCTGTCAAATTTTTCAAGATCTGACTCCTTATTATCAGCAATTTTCAGCTTATTATA
AAAAAGCAAAAAATAAAAATCTCCAAGTGCTCTATCCGCCAATTTTTTATGCAAAGATTTTTGGTAGTATTTATGATAGA
ATAGGAAAGACGGAGGAAATTTTATGGCAAAACAAAGAAATGAAATTGAAGAAAAATATACTTGGGATTTAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (23-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	53.822	91.545	0.493
coiA	Streptococcus mitis NCTC 12261	53.822	91.545	0.493
coiA	Streptococcus pneumoniae Rx1	53.503	91.545	0.49
coiA	Streptococcus pneumoniae D39	53.503	91.545	0.49
coiA	Streptococcus pneumoniae R6	53.503	91.545	0.49
coiA	Lactococcus lactis subsp. cremoris KW2	44.753	94.461	0.423