Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DQN36_RS01825 | Genome accession | NZ_LS483425 |
| Coordinates | 334861..335352 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain NCTC13737 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 329861..340352
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN36_RS01795 (NCTC13737_00354) | - | 331050..331550 (+) | 501 | WP_021299043.1 | phosphatase PAP2 family protein | - |
| DQN36_RS01800 (NCTC13737_00355) | trxA | 331613..331945 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| DQN36_RS01805 (NCTC13737_00356) | - | 331997..332584 (-) | 588 | WP_076639280.1 | helix-turn-helix domain-containing protein | - |
| DQN36_RS01810 (NCTC13737_00357) | mutY | 332761..333915 (-) | 1155 | WP_002988276.1 | A/G-specific adenine glycosylase | - |
| DQN36_RS01815 (NCTC13737_00358) | - | 334083..334376 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| DQN36_RS01820 (NCTC13737_00359) | rpsF | 334549..334839 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| DQN36_RS01825 (NCTC13737_00360) | ssb | 334861..335352 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| DQN36_RS01830 (NCTC13737_00361) | rpsR | 335517..335756 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| DQN36_RS01835 (NCTC13737_00362) | - | 335889..336545 (-) | 657 | WP_111704011.1 | DUF1129 domain-containing protein | - |
| DQN36_RS01840 (NCTC13737_00363) | - | 336677..337621 (-) | 945 | WP_111704012.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=1141136 DQN36_RS01825 WP_002983122.1 334861..335352(+) (ssb) [Streptococcus pyogenes strain NCTC13737]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1141136 DQN36_RS01825 WP_002983122.1 334861..335352(+) (ssb) [Streptococcus pyogenes strain NCTC13737]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |