Detailed information NTG1140917

Bioinformatically predicted

Overview

• Name: comFC/cflB
• Type: Machinery gene
• Locus tag: DQN54_RS11090
• Genome accession: NZ_LS483417
• Coordinates: 2060402..2061064 (-)
• Length: 220 a.a.
• NCBI ID: WP_000649964.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain NCTC11902
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2055402..2066064

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN54_RS11065 (NCTC11902_02123)	-	2055552..2055818 (-)	267	WP_001278167.1	Veg family protein	-
DQN54_RS11070 (NCTC11902_02124)	dnaB	2055820..2057172 (-)	1353	WP_000852499.1	replicative DNA helicase	-
DQN54_RS11075 (NCTC11902_02125)	rplI	2057216..2057668 (-)	453	WP_000864220.1	50S ribosomal protein L9	-
DQN54_RS11080 (NCTC11902_02126)	-	2057665..2059638 (-)	1974	WP_000715111.1	DHH family phosphoesterase	-
DQN54_RS11085 (NCTC11902_02127)	hpf	2059774..2060322 (-)	549	WP_000599107.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
DQN54_RS11090 (NCTC11902_02128)	comFC/cflB	2060402..2061064 (-)	663	WP_000649964.1	ComF family protein	Machinery gene
DQN54_RS11095 (NCTC11902_02129)	comFA/cflA	2061061..2062359 (-)	1299	WP_000867608.1	DEAD/DEAH box helicase	Machinery gene
DQN54_RS11100 (NCTC11902_02130)	-	2062415..2063050 (+)	636	WP_000395729.1	YigZ family protein	-
DQN54_RS11110 (NCTC11902_02131)	cysK	2063335..2064255 (+)	921	WP_000029866.1	cysteine synthase A	-
DQN54_RS11120 (NCTC11902_02132)	-	2064494..2064844 (-)	351	Protein_2058	IS66 family transposase	-
DQN54_RS11125	-	2064844..2065136 (+)	293	Protein_2059	transposase	-
DQN54_RS11130 (NCTC11902_02133)	tnpB	2065277..2065600 (-)	324	WP_000973414.1	IS66 family insertion sequence element accessory protein TnpB	-

Sequence

Protein

• Length: 220 a.a.
• Molecular weight: 25253.15 Da
• Isoelectric Point: 7.3688

>NTDB_id=1140917 DQN54_RS11090 WP_000649964.1 2060402..2061064(-) (comFC/cflB) [Streptococcus pneumoniae strain NCTC11902]
MKCLLCGQTMKTVLTFSSLLLLRNDDSCLCSDCDSTFERIGEENCPNCMKTELSIKCQDCQLWCKEGVEVSHRAIFTYNQ
AMKDFFSRYKFDGDFLLRKVFASFLSEELKKYKEYQFVVIPLSPDRYANRGFNQVEGLVEAAGFEYLDLLEKREERASSS
KNRSERLGTELPFFIKSGVTIPKKILLIDDIYTTGATINRVKKLLEEAGAKDVKTFSLVR

Nucleotide

• Length: 663 bp

>NTDB_id=1140917 DQN54_RS11090 WP_000649964.1 2060402..2061064(-) (comFC/cflB) [Streptococcus pneumoniae strain NCTC11902]
ATGAAGTGCTTGTTATGTGGGCAGACTATGAAGACTGTTTTAACTTTTAGTAGTCTCTTACTTCTGAGGAATGATGACTC
TTGTCTTTGTTCAGACTGTGATTCTACTTTTGAAAGAATTGGGGAAGAGAACTGTCCAAATTGTATGAAAACAGAGTTGT
CAATAAAGTGTCAAGATTGTCAACTTTGGTGTAAAGAGGGAGTTGAAGTCAGTCATAGAGCGATTTTTACTTACAATCAA
GCTATGAAGGATTTTTTCAGTCGGTATAAGTTTGATGGAGACTTCCTGTTAAGAAAAGTTTTCGCTTCATTTTTAAGTGA
GGAGTTGAAAAAGTACAAAGAGTATCAATTTGTTGTAATTCCCCTAAGTCCTGATAGATATGCTAATAGAGGATTTAATC
AGGTTGAGGGCTTGGTAGAGGCAGCAGGCTTTGAGTATCTGGATTTATTAGAGAAAAGAGAAGAGAGAGCCAGTTCTTCT
AAAAATCGTTCAGAGCGCTTGGGGACAGAACTTCCTTTCTTTATTAAAAGTGGAGTCACTATTCCTAAAAAAATCCTACT
TATAGATGATATCTATACTACAGGAGCAACTATAAATCGTGTTAAGAAACTGTTGGAAGAAGCTGGTGCTAAGGATGTAA
AAACATTTTCCCTTGTAAGATGA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (153-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC/cflB	Streptococcus pneumoniae TIGR4	99.545	100	0.995
comFC/cflB	Streptococcus pneumoniae Rx1	99.091	100	0.991
comFC/cflB	Streptococcus pneumoniae D39	99.091	100	0.991
comFC/cflB	Streptococcus pneumoniae R6	99.091	100	0.991
comFC/cflB	Streptococcus mitis NCTC 12261	91.818	100	0.918
comFC/cflB	Streptococcus mitis SK321	90.909	100	0.909