Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DQN44_RS01820 | Genome accession | NZ_LS483414 |
| Coordinates | 336414..336905 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain NCTC13736 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 331414..341905
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN44_RS01790 (NCTC13736_00352) | - | 332621..333121 (+) | 501 | WP_011018191.1 | phosphatase PAP2 family protein | - |
| DQN44_RS01795 (NCTC13736_00353) | trxA | 333184..333516 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| DQN44_RS01800 (NCTC13736_00354) | - | 333562..334137 (-) | 576 | WP_030127554.1 | helix-turn-helix domain-containing protein | - |
| DQN44_RS01805 (NCTC13736_00355) | mutY | 334314..335468 (-) | 1155 | WP_164972006.1 | A/G-specific adenine glycosylase | - |
| DQN44_RS01810 (NCTC13736_00356) | - | 335636..335929 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| DQN44_RS01815 (NCTC13736_00357) | rpsF | 336102..336392 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| DQN44_RS01820 (NCTC13736_00358) | ssb | 336414..336905 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| DQN44_RS01825 (NCTC13736_00359) | rpsR | 337070..337309 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| DQN44_RS01830 (NCTC13736_00360) | - | 337442..338098 (-) | 657 | WP_002983144.1 | DUF1129 domain-containing protein | - |
| DQN44_RS01835 (NCTC13736_00361) | - | 338230..339174 (-) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=1140751 DQN44_RS01820 WP_002983122.1 336414..336905(+) (ssb) [Streptococcus pyogenes strain NCTC13736]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1140751 DQN44_RS01820 WP_002983122.1 336414..336905(+) (ssb) [Streptococcus pyogenes strain NCTC13736]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |