Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQM63_RS07570 Genome accession   NZ_LS483385
Coordinates   1532018..1532818 (-) Length   266 a.a.
NCBI ID   WP_002913382.1    Uniprot ID   A0A427ZVM0
Organism   Streptococcus sanguinis strain NCTC7863     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1527018..1537818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM63_RS07555 (NCTC7863_01489) smc 1527220..1530756 (-) 3537 WP_002913384.1 chromosome segregation protein SMC -
  DQM63_RS07560 (NCTC7863_01490) rnc 1530747..1531445 (-) 699 WP_002913383.1 ribonuclease III -
  DQM63_RS07565 (NCTC7863_01491) - 1531567..1531926 (-) 360 WP_002906095.1 YbaN family protein -
  DQM63_RS07570 (NCTC7863_01492) vicX 1532018..1532818 (-) 801 WP_002913382.1 MBL fold metallo-hydrolase Regulator
  DQM63_RS07575 (NCTC7863_01493) micB 1532828..1534177 (-) 1350 WP_002899938.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQM63_RS07580 (NCTC7863_01494) micA 1534170..1534871 (-) 702 WP_002894937.1 response regulator YycF Regulator
  DQM63_RS07585 (NCTC7863_01495) - 1535208..1535969 (+) 762 WP_002913381.1 amino acid ABC transporter ATP-binding protein -
  DQM63_RS07590 (NCTC7863_01496) - 1535984..1536796 (+) 813 WP_002913380.1 transporter substrate-binding domain-containing protein -
  DQM63_RS07595 (NCTC7863_01497) - 1536809..1537489 (+) 681 WP_002913378.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29735.62 Da        Isoelectric Point: 5.9065

>NTDB_id=1139636 DQM63_RS07570 WP_002913382.1 1532018..1532818(-) (vicX) [Streptococcus sanguinis strain NCTC7863]
MTKGFQYSILASGSSGNCFYLETDQKRILVDAGLSGKKITSLLGEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLDI
YANEATWKAMEKDLGKLDASQKHIFELGKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIE
NADGYLIESNHDIEILRSGAYPWSLKQRILSDMGHLSNEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLA
QADMAVGHDFQVYDTSPDTATPLTSI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=1139636 DQM63_RS07570 WP_002913382.1 1532018..1532818(-) (vicX) [Streptococcus sanguinis strain NCTC7863]
ATGACTAAAGGATTTCAATACAGTATTCTGGCGTCAGGATCAAGCGGTAACTGTTTCTATCTGGAAACAGATCAAAAGCG
GATTCTGGTTGACGCTGGCTTATCAGGCAAGAAAATCACTAGCTTGCTGGGCGAAATTGACCGCAAGCCTGAGGATTTGG
ATGCCATTTTAGTGACCCATGAGCACAAGGACCACATTCATGGTGTTGGAGTGTTGGCCCGCAAGTATCATCTGGATATT
TATGCTAATGAGGCTACTTGGAAGGCTATGGAAAAGGACTTGGGGAAGCTGGATGCTAGTCAAAAGCATATCTTTGAATT
GGGCAAGACCAAGACCTTTGGAGACTTGGATGTGGAGAGCTTTGGTGTCAGCCATGACGCAGCCTGTCCACAGTTTTACC
GCTTCATGAAAGATGACAAAAGCTTTGTCATGCTTACGGATACGGGCTATGTCAGTGACCGGATGGCTGGGATTATCGAA
AATGCCGACGGGTACTTGATTGAGAGCAACCATGATATTGAAATTCTTCGCAGCGGCGCCTATCCTTGGAGTCTCAAGCA
GCGAATTCTGTCGGATATGGGTCACCTGTCCAATGAAGATGGAGCAGAGACCATGATTCGGACTCTGGGTAATCGCACCA
AGCGAATCTATCTGGGGCATCTCAGTAAGGAAAATAATATCAAGGAATTGGCTCACATGACCATGGTCAATCAACTGGCT
CAAGCCGATATGGCAGTCGGCCATGATTTCCAGGTCTATGATACCTCGCCTGATACCGCAACACCTTTGACGAGTATTTA
A

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(27-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A427ZVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.749

98.872

0.808

Multiple sequence alignment