Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   DQM67_RS01180 Genome accession   NZ_LS483383
Coordinates   217648..218280 (+) Length   210 a.a.
NCBI ID   WP_045501297.1    Uniprot ID   -
Organism   Streptococcus cristatus ATCC 51100 strain NCTC 12479     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 212648..223280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM67_RS01150 (NCTC12479_00219) hutI 212881..214146 (+) 1266 WP_005592444.1 imidazolonepropionase -
  DQM67_RS01155 (NCTC12479_00220) - 214282..214704 (-) 423 WP_037586371.1 hypothetical protein -
  DQM67_RS01160 (NCTC12479_00221) - 214685..215593 (-) 909 WP_005591195.1 phosphodiester glycosidase family protein -
  DQM67_RS01165 (NCTC12479_00222) - 215590..216639 (-) 1050 WP_005591194.1 bifunctional glycosyltransferase family 2/GtrA family protein -
  DQM67_RS01175 (NCTC12479_00223) - 216966..217481 (-) 516 WP_005592380.1 DNA starvation/stationary phase protection protein -
  DQM67_RS01180 (NCTC12479_00224) cclA/cilC 217648..218280 (+) 633 WP_045501297.1 A24 family peptidase Machinery gene
  DQM67_RS01185 (NCTC12479_00225) sstT 218317..219534 (-) 1218 WP_005591192.1 serine/threonine transporter SstT -
  DQM67_RS01190 (NCTC12479_00226) - 219698..220570 (+) 873 WP_005591191.1 mechanosensitive ion channel family protein -
  DQM67_RS01200 (NCTC12479_00227) - 220898..221791 (+) 894 WP_005592034.1 YafY family protein -
  DQM67_RS01205 (NCTC12479_00228) - 221858..222472 (+) 615 WP_005592044.1 GyrI-like domain-containing protein -
  DQM67_RS01210 (NCTC12479_00229) - 222485..223036 (+) 552 WP_005591188.1 ClbS/DfsB family four-helix bundle protein -

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 23777.63 Da        Isoelectric Point: 7.8169

>NTDB_id=1139484 DQM67_RS01180 WP_045501297.1 217648..218280(+) (cclA/cilC) [Streptococcus cristatus ATCC 51100 strain NCTC 12479]
MIHLYFFLVGTVLASFLGLVIDRFPEQSIISPSSHCDNCKQILKARDLVPILSQLLNGFRCRFCKIQLPVWYAAFELVLG
LLFLSWSLGYLSLAQLLLLTMGLTLAIYDQREQEYPLLIWLIFQFLLMATAGINPLMLFFLALGLLAFFYDLRIGAGDFL
FLASCSAIFSLTEILILIQIASFSGLACYCFKKKKDRLAFVPCLLFGKDN

Nucleotide


Download         Length: 633 bp        

>NTDB_id=1139484 DQM67_RS01180 WP_045501297.1 217648..218280(+) (cclA/cilC) [Streptococcus cristatus ATCC 51100 strain NCTC 12479]
ATGATTCATCTATACTTTTTTCTAGTCGGAACGGTTCTGGCCTCCTTTCTAGGCTTAGTTATTGACCGCTTCCCAGAACA
ATCCATCATCTCACCAAGCAGCCACTGTGACAACTGCAAGCAGATACTCAAAGCACGGGATTTGGTCCCAATCCTGTCTC
AGTTGCTTAATGGCTTCCGCTGCCGTTTCTGCAAGATCCAGCTGCCTGTCTGGTATGCTGCTTTTGAGTTAGTGCTGGGT
TTACTTTTTCTAAGCTGGAGCTTAGGCTATCTTTCACTAGCCCAGCTCTTACTGCTAACGATGGGCTTGACCCTAGCTAT
CTACGATCAGCGTGAGCAAGAATACCCTCTTCTAATCTGGCTGATTTTTCAGTTCTTGCTGATGGCGACAGCGGGTATCA
ATCCGCTCATGCTCTTCTTTTTAGCCCTAGGACTTCTAGCCTTCTTTTATGATCTTCGCATCGGTGCTGGCGACTTTCTC
TTTCTAGCTTCCTGTTCTGCTATTTTCAGCCTGACAGAAATTCTCATTCTCATCCAAATCGCTAGCTTCTCTGGTCTCGC
TTGTTATTGCTTTAAAAAGAAAAAAGACAGGCTAGCATTTGTACCCTGTCTCTTGTTTGGTAAAGACAATTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-85)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

65.385

99.048

0.648
  cclA/cilC Streptococcus mitis NCTC 12261

66.341

97.619

0.648
  cclA/cilC Streptococcus pneumoniae TIGR4

63.462

99.048

0.629
  cclA/cilC Streptococcus pneumoniae Rx1

62.802

98.571

0.619
  cclA/cilC Streptococcus pneumoniae D39

62.802

98.571

0.619
  cclA/cilC Streptococcus pneumoniae R6

62.802

98.571

0.619

Multiple sequence alignment