Detailed information NTG1139195

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: DQN92_RS16610
• Genome accession: NZ_LS483377
• Coordinates: 3557229..3558287 (-)
• Length: 352 a.a.
• NCBI ID: WP_005410860.1
• Uniprot ID: A0A854DVP1
• Organism: Stenotrophomonas maltophilia strain NCTC10258
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3552229..3563287

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN92_RS16590 (NCTC10258_03292)	-	3553185..3555152 (-)	1968	WP_088431148.1	type IV pilus secretin PilQ	-
DQN92_RS16595 (NCTC10258_03293)	-	3555174..3555677 (-)	504	WP_044571441.1	pilus assembly protein PilP	-
DQN92_RS16600 (NCTC10258_03294)	pilO	3555704..3556360 (-)	657	WP_005410857.1	type 4a pilus biogenesis protein PilO	-
DQN92_RS16605 (NCTC10258_03295)	-	3556357..3557229 (-)	873	WP_111687622.1	PilN domain-containing protein	-
DQN92_RS16610 (NCTC10258_03296)	pilM	3557229..3558287 (-)	1059	WP_005410860.1	pilus assembly protein PilM	Machinery gene
DQN92_RS16615 (NCTC10258_03297)	-	3558507..3560930 (+)	2424	WP_111687623.1	penicillin-binding protein 1A	-
DQN92_RS16620 (NCTC10258_03298)	-	3561162..3561806 (+)	645	WP_005414350.1	hypothetical protein	-
DQN92_RS16625 (NCTC10258_03299)	-	3561983..3562726 (-)	744	WP_111687624.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37739.38 Da
• Isoelectric Point: 4.4047

>NTDB_id=1139195 DQN92_RS16610 WP_005410860.1 3557229..3558287(-) (pilM) [Stenotrophomonas maltophilia strain NCTC10258]
MGLIPKSQSPLVGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAMNRSGSKAKLAAAA
VAGSAVITKVIPMPAELDENDMEAQIELEAVNYIPYPIEEVNLDFEVIGAIPNNPEMVQVLLAASRSENVELRQSALELG
GLQAKVMDVEAFAVENAYALVASELPVSIDGVVALVDIGATMTTLNVLRGGRSLYSREQVFGGKQLTDEIMRRYGLSYEE
AGLAKRQGGLPESYEMEVLEPFKEATVQQISRLLQFFYAGSEFNRVDHIVLAGGCAVLGGLPEMVEEQLGVPTVVANPLA
QMTLGPKVNAHALAQDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1139195 DQN92_RS16610 WP_005410860.1 3557229..3558287(-) (pilM) [Stenotrophomonas maltophilia strain NCTC10258]
GTGGGGCTCATCCCAAAAAGTCAGTCGCCGCTTGTAGGCGTCGACATCAGTTCGACTGCGGTAAAGCTTTTGCAGCTGTC
CCGCAGCGGCAATCGTTTCCGTGTGGAACATTACGCTGTGGAACCTCTTCCGCCGAATGCGGTGGTAGAGAAGAACATCG
TGGAAGTGGAGGCCGTGGGTGAGGCCATCCGCCGTGCGATGAACCGTTCAGGCAGCAAGGCCAAGCTGGCCGCTGCCGCC
GTCGCCGGGTCGGCGGTGATCACCAAGGTGATCCCGATGCCGGCCGAGCTCGACGAGAACGACATGGAAGCCCAGATCGA
GCTGGAAGCGGTCAACTACATTCCGTACCCGATCGAGGAAGTGAACCTGGACTTCGAGGTGATCGGGGCGATCCCGAACA
ACCCGGAGATGGTCCAGGTGCTGCTGGCCGCGTCGCGTTCGGAGAACGTGGAACTGCGCCAGTCGGCCCTGGAACTGGGT
GGCTTGCAGGCCAAGGTGATGGACGTGGAGGCCTTCGCGGTCGAGAACGCCTACGCCCTGGTCGCCAGCGAGCTGCCGGT
GTCCATCGACGGCGTGGTCGCGCTGGTCGATATCGGCGCCACCATGACCACCCTCAACGTCCTGCGCGGCGGCCGCAGCC
TGTACAGCCGCGAACAGGTGTTCGGTGGCAAGCAGCTGACCGACGAGATCATGCGCCGCTACGGCCTGAGCTACGAGGAG
GCCGGCCTGGCCAAGCGCCAGGGCGGACTGCCGGAAAGCTACGAGATGGAAGTGCTGGAGCCGTTCAAGGAAGCCACGGT
CCAGCAGATCAGCCGCCTGCTGCAGTTCTTCTATGCAGGCAGTGAGTTCAACCGCGTTGATCACATCGTGCTGGCCGGCG
GCTGCGCCGTGCTGGGCGGGCTGCCGGAAATGGTCGAGGAGCAGCTGGGCGTGCCGACCGTGGTCGCCAACCCGCTGGCA
CAGATGACGTTGGGCCCCAAGGTGAACGCGCATGCGCTGGCTCAGGATGCCCCCGCGCTGATGATCGCCACCGGTCTGGC
GCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

3D structure

• AlphaFold DB: A0A854DVP1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.136	100	0.511
comM	Acinetobacter nosocomialis M2	51.136	100	0.511
comM	Acinetobacter baylyi ADP1	50	100	0.5
pilM	Legionella pneumophila strain ERS1305867	47.863	99.716	0.477