Detailed information
Bioinformatically predicted
Overview
| Name | micB | Type | Regulator |
| Locus tag | DQM54_RS03845 | Genome accession | NZ_LS483375 |
| Coordinates | 777069..778430 (+) | Length | 453 a.a. |
| NCBI ID | WP_111723481.1 | Uniprot ID | - |
| Organism | Streptococcus gordonii strain NCTC3165 | ||
| Function | repress competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 772069..783430
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM54_RS10920 (NCTC3165_00756) | - | 772697..773068 (+) | 372 | WP_111724283.1 | hypothetical protein | - |
| DQM54_RS03825 (NCTC3165_00757) | thrS | 773160..775103 (+) | 1944 | WP_111723479.1 | threonine--tRNA ligase | - |
| DQM54_RS03830 (NCTC3165_00758) | - | 775158..775520 (-) | 363 | WP_111723480.1 | MerR family transcriptional regulator | - |
| DQM54_RS03835 (NCTC3165_00759) | - | 775598..775975 (+) | 378 | WP_002899930.1 | carboxymuconolactone decarboxylase family protein | - |
| DQM54_RS03840 (NCTC3165_00760) | micA | 776375..777076 (+) | 702 | WP_008809004.1 | response regulator YycF | Regulator |
| DQM54_RS03845 (NCTC3165_00761) | micB | 777069..778430 (+) | 1362 | WP_111723481.1 | cell wall metabolism sensor histidine kinase VicK | Regulator |
| DQM54_RS03850 (NCTC3165_00762) | vicX | 778423..779226 (+) | 804 | WP_045634630.1 | MBL fold metallo-hydrolase | Regulator |
| DQM54_RS03855 (NCTC3165_00763) | - | 779261..779617 (+) | 357 | WP_008809001.1 | YbaN family protein | - |
| DQM54_RS03860 (NCTC3165_00764) | rnc | 779860..780558 (+) | 699 | WP_061601751.1 | ribonuclease III | - |
Sequence
Protein
Download Length: 453 a.a. Molecular weight: 51726.75 Da Isoelectric Point: 4.3793
>NTDB_id=1139115 DQM54_RS03845 WP_111723481.1 777069..778430(+) (micB) [Streptococcus gordonii strain NCTC3165]
MIENIRQFVFSVDFVFVLIVLGFILVVALLFLENRRDNRQLRLLNQKIKDLIAGDYSEVLDMQGSPEITDMTNSINDLSE
VTRLTQENLEQETKRLTSILSYMTDGVLATNRRGQIIMINDMASKQLGVDPEEVQNTSILDLLDIADEYDLRDLITKMPE
LTIDSQDENGEYLSLRVRFALVRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPEFVKVSLTETNRMMRMVSDLLSLSRIDNDSSHLDVELTNFTAFITFILNRFDKIKSQDETKKYEIVRDYPITPIW
VEIDTDKMTQVIDNIMNNAIKYSPDGGKITVGMKTTEDQLIISISDEGLGIPKKDLPKIFDRFYRVDKARSRAQGGTGLG
LAIAKEIIKQHHGFIWAKSEYEVGSTFTIVLPYDKDAVLDDDWENEEVESKDD
MIENIRQFVFSVDFVFVLIVLGFILVVALLFLENRRDNRQLRLLNQKIKDLIAGDYSEVLDMQGSPEITDMTNSINDLSE
VTRLTQENLEQETKRLTSILSYMTDGVLATNRRGQIIMINDMASKQLGVDPEEVQNTSILDLLDIADEYDLRDLITKMPE
LTIDSQDENGEYLSLRVRFALVRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPEFVKVSLTETNRMMRMVSDLLSLSRIDNDSSHLDVELTNFTAFITFILNRFDKIKSQDETKKYEIVRDYPITPIW
VEIDTDKMTQVIDNIMNNAIKYSPDGGKITVGMKTTEDQLIISISDEGLGIPKKDLPKIFDRFYRVDKARSRAQGGTGLG
LAIAKEIIKQHHGFIWAKSEYEVGSTFTIVLPYDKDAVLDDDWENEEVESKDD
Nucleotide
Download Length: 1362 bp
>NTDB_id=1139115 DQM54_RS03845 WP_111723481.1 777069..778430(+) (micB) [Streptococcus gordonii strain NCTC3165]
ATGATTGAAAATATTAGACAATTTGTGTTTTCTGTAGATTTTGTTTTTGTTTTAATTGTTTTAGGTTTTATTTTGGTTGT
TGCCCTGCTCTTTTTAGAGAATCGAAGGGATAATCGCCAACTTCGTCTGCTCAATCAAAAGATCAAAGATTTAATCGCAG
GAGACTATTCCGAGGTTCTGGATATGCAAGGCAGTCCAGAAATTACGGATATGACCAATAGTATAAATGATTTGTCTGAG
GTGACTAGATTAACACAAGAAAATCTGGAGCAAGAAACCAAACGTTTGACTAGTATTTTGTCCTACATGACGGATGGGGT
TTTGGCAACCAACCGTCGAGGCCAGATTATCATGATTAATGATATGGCTTCTAAGCAACTAGGTGTTGATCCAGAGGAAG
TCCAAAATACAAGTATTTTAGACTTGTTAGATATTGCGGATGAATATGATCTGCGAGATTTAATTACCAAGATGCCGGAG
TTGACGATTGATTCACAGGATGAAAATGGAGAATATTTAAGTCTGCGTGTTCGTTTTGCCTTGGTTCGTAGGGAATCTGG
TTTTATCTCTGGTTTGGTAGCTGTTCTGCACGATACGACGGAACAGGAAAAAGAGGAGCGGGAACGTCGACTTTTTGTAT
CAAATGTTAGTCATGAGCTCCGGACCCCTTTGACAAGTGTTAAGTCTTACCTAGAAGCTTTGGATGAGGGCGCTCTTTCT
GAGCCAGTTGCTCCCGAATTTGTTAAAGTTTCTCTTACTGAAACGAACCGAATGATGCGGATGGTTTCTGATTTGCTTAG
CTTATCAAGGATTGATAATGATAGTAGTCATTTGGATGTAGAATTAACTAATTTTACAGCTTTTATCACTTTTATTTTGA
ATCGTTTTGATAAGATTAAAAGTCAGGATGAAACCAAAAAATATGAGATTGTACGAGATTATCCAATCACACCTATTTGG
GTTGAAATTGATACTGATAAAATGACGCAGGTCATTGATAATATCATGAATAATGCTATCAAGTATTCTCCAGATGGTGG
AAAGATTACCGTAGGGATGAAAACGACGGAAGATCAGCTGATTATTTCAATTTCTGATGAAGGATTGGGAATTCCCAAAA
AAGACCTACCTAAGATCTTTGACCGTTTTTATCGAGTGGATAAGGCTCGAAGCCGTGCGCAAGGTGGAACAGGCTTAGGA
CTTGCGATTGCAAAAGAAATCATCAAGCAGCACCATGGTTTTATCTGGGCAAAGAGTGAGTATGAAGTCGGATCGACTTT
TACAATTGTCCTACCGTATGATAAGGATGCTGTTTTGGATGATGACTGGGAAAATGAAGAAGTAGAAAGTAAAGATGACT
AA
ATGATTGAAAATATTAGACAATTTGTGTTTTCTGTAGATTTTGTTTTTGTTTTAATTGTTTTAGGTTTTATTTTGGTTGT
TGCCCTGCTCTTTTTAGAGAATCGAAGGGATAATCGCCAACTTCGTCTGCTCAATCAAAAGATCAAAGATTTAATCGCAG
GAGACTATTCCGAGGTTCTGGATATGCAAGGCAGTCCAGAAATTACGGATATGACCAATAGTATAAATGATTTGTCTGAG
GTGACTAGATTAACACAAGAAAATCTGGAGCAAGAAACCAAACGTTTGACTAGTATTTTGTCCTACATGACGGATGGGGT
TTTGGCAACCAACCGTCGAGGCCAGATTATCATGATTAATGATATGGCTTCTAAGCAACTAGGTGTTGATCCAGAGGAAG
TCCAAAATACAAGTATTTTAGACTTGTTAGATATTGCGGATGAATATGATCTGCGAGATTTAATTACCAAGATGCCGGAG
TTGACGATTGATTCACAGGATGAAAATGGAGAATATTTAAGTCTGCGTGTTCGTTTTGCCTTGGTTCGTAGGGAATCTGG
TTTTATCTCTGGTTTGGTAGCTGTTCTGCACGATACGACGGAACAGGAAAAAGAGGAGCGGGAACGTCGACTTTTTGTAT
CAAATGTTAGTCATGAGCTCCGGACCCCTTTGACAAGTGTTAAGTCTTACCTAGAAGCTTTGGATGAGGGCGCTCTTTCT
GAGCCAGTTGCTCCCGAATTTGTTAAAGTTTCTCTTACTGAAACGAACCGAATGATGCGGATGGTTTCTGATTTGCTTAG
CTTATCAAGGATTGATAATGATAGTAGTCATTTGGATGTAGAATTAACTAATTTTACAGCTTTTATCACTTTTATTTTGA
ATCGTTTTGATAAGATTAAAAGTCAGGATGAAACCAAAAAATATGAGATTGTACGAGATTATCCAATCACACCTATTTGG
GTTGAAATTGATACTGATAAAATGACGCAGGTCATTGATAATATCATGAATAATGCTATCAAGTATTCTCCAGATGGTGG
AAAGATTACCGTAGGGATGAAAACGACGGAAGATCAGCTGATTATTTCAATTTCTGATGAAGGATTGGGAATTCCCAAAA
AAGACCTACCTAAGATCTTTGACCGTTTTTATCGAGTGGATAAGGCTCGAAGCCGTGCGCAAGGTGGAACAGGCTTAGGA
CTTGCGATTGCAAAAGAAATCATCAAGCAGCACCATGGTTTTATCTGGGCAAAGAGTGAGTATGAAGTCGGATCGACTTT
TACAATTGTCCTACCGTATGATAAGGATGCTGTTTTGGATGATGACTGGGAAAATGAAGAAGTAGAAAGTAAAGATGACT
AA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| micB | Streptococcus pneumoniae Cp1015 |
80.822 |
96.689 |
0.781 |
| vicK | Streptococcus mutans UA159 |
70.316 |
90.728 |
0.638 |