Detailed information
Bioinformatically predicted
Overview
| Name | pptB | Type | Regulator |
| Locus tag | DQM54_RS02665 | Genome accession | NZ_LS483375 |
| Coordinates | 549695..550750 (+) | Length | 351 a.a. |
| NCBI ID | WP_111723356.1 | Uniprot ID | - |
| Organism | Streptococcus gordonii strain NCTC3165 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 544695..555750
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM54_RS02635 (NCTC3165_00520) | tsaE | 545861..546307 (+) | 447 | WP_111723352.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| DQM54_RS02640 (NCTC3165_00521) | - | 546307..546831 (+) | 525 | WP_060552974.1 | GNAT family N-acetyltransferase | - |
| DQM54_RS02645 (NCTC3165_00522) | brpA | 546838..548049 (+) | 1212 | WP_045505870.1 | biofilm formation/cell division transcriptional regulator BrpA | - |
| DQM54_RS02650 (NCTC3165_00523) | - | 548099..548401 (-) | 303 | WP_111723353.1 | hypothetical protein | - |
| DQM54_RS02655 (NCTC3165_00524) | - | 548412..548828 (-) | 417 | WP_111723354.1 | HIT family protein | - |
| DQM54_RS02660 (NCTC3165_00525) | pptA | 548967..549698 (+) | 732 | WP_111723355.1 | ABC transporter ATP-binding protein | Regulator |
| DQM54_RS02665 (NCTC3165_00526) | pptB | 549695..550750 (+) | 1056 | WP_111723356.1 | ABC transporter permease | Regulator |
| DQM54_RS02670 (NCTC3165_00527) | ccrZ | 550791..551585 (+) | 795 | WP_111723357.1 | cell cycle regulator CcrZ | - |
| DQM54_RS02675 (NCTC3165_00528) | trmB | 551582..552217 (+) | 636 | WP_111723358.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| DQM54_RS02680 (NCTC3165_00529) | rimP | 552329..552817 (+) | 489 | WP_111723359.1 | ribosome maturation factor RimP | - |
| DQM54_RS02685 (NCTC3165_00530) | nusA | 552863..554104 (+) | 1242 | WP_111723360.1 | transcription termination factor NusA | - |
| DQM54_RS02690 (NCTC3165_00531) | rnpM | 554115..554411 (+) | 297 | WP_008808548.1 | RNase P modulator RnpM | - |
| DQM54_RS02695 (NCTC3165_00532) | - | 554404..554703 (+) | 300 | WP_008808549.1 | YlxQ-related RNA-binding protein | - |
| DQM54_RS11020 | - | 554721..554973 (+) | 253 | Protein_525 | translation initiation factor IF-2 N-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 41269.76 Da Isoelectric Point: 10.3118
>NTDB_id=1139102 DQM54_RS02665 WP_111723356.1 549695..550750(+) (pptB) [Streptococcus gordonii strain NCTC3165]
MREVFAKRKLDFRNQCVKYLRYVLNDHFVLFLMVFLGFTAVQYSQLLRNFPKNHLPIWLALVLLSLGLVFMGRIATYLEK
PDSLFLLAKEEEVRVYVGKQRRNSFILWGFLQTLALLLLAPLFLALGVPIWGFTLYCLFLFALKVLVFQWKSKKFYLQEG
LDWKSLIAYEERRKQRILQFFALFTNVKGISSSVKRRAYLDFLTNRLSKNQEKVWDNLFLRSYLRNGDFFALSLRLLILS
LLIIIFLPQSMIATIFVGLFQYLLLFQLLALYDAYDYQYLIKLFPLEESAKVKGAKRVITSIGAVILLVELLAALLFFKE
KIMVLFILLVYLILYAVYLPYKLKGLVDERA
MREVFAKRKLDFRNQCVKYLRYVLNDHFVLFLMVFLGFTAVQYSQLLRNFPKNHLPIWLALVLLSLGLVFMGRIATYLEK
PDSLFLLAKEEEVRVYVGKQRRNSFILWGFLQTLALLLLAPLFLALGVPIWGFTLYCLFLFALKVLVFQWKSKKFYLQEG
LDWKSLIAYEERRKQRILQFFALFTNVKGISSSVKRRAYLDFLTNRLSKNQEKVWDNLFLRSYLRNGDFFALSLRLLILS
LLIIIFLPQSMIATIFVGLFQYLLLFQLLALYDAYDYQYLIKLFPLEESAKVKGAKRVITSIGAVILLVELLAALLFFKE
KIMVLFILLVYLILYAVYLPYKLKGLVDERA
Nucleotide
Download Length: 1056 bp
>NTDB_id=1139102 DQM54_RS02665 WP_111723356.1 549695..550750(+) (pptB) [Streptococcus gordonii strain NCTC3165]
ATGAGAGAAGTATTTGCTAAGCGCAAACTGGATTTTCGGAATCAGTGTGTCAAATATCTGCGCTATGTTTTGAATGACCA
CTTTGTTCTATTTTTAATGGTTTTCTTGGGTTTTACAGCGGTTCAATACAGCCAGTTGCTTCGCAATTTTCCTAAGAATC
ATTTGCCTATCTGGCTAGCCTTAGTCCTCCTATCACTGGGCTTGGTTTTTATGGGCAGGATTGCTACTTATCTTGAAAAG
CCAGATAGCCTCTTTCTTTTGGCTAAGGAAGAAGAAGTACGTGTCTATGTCGGCAAACAAAGGCGAAATTCTTTTATTCT
TTGGGGATTTTTGCAAACCTTGGCTTTGCTTCTGTTGGCTCCTCTTTTTCTAGCCTTAGGTGTGCCTATCTGGGGCTTTA
CTCTATATTGTTTGTTCCTATTTGCTTTGAAAGTTTTGGTATTTCAATGGAAAAGTAAGAAATTCTATTTGCAGGAAGGG
CTTGATTGGAAGTCTCTAATTGCCTACGAAGAGAGACGTAAACAGCGAATTTTGCAATTTTTTGCTCTCTTTACGAATGT
TAAGGGAATATCAAGTAGCGTAAAAAGACGAGCTTATTTAGATTTCTTGACCAACCGCCTGTCCAAGAACCAAGAGAAAG
TTTGGGACAATCTCTTCTTGCGCTCTTATTTGAGAAATGGGGACTTTTTTGCTCTTAGTCTACGTTTGTTAATTTTATCA
TTGCTGATTATTATTTTTCTACCTCAAAGCATGATTGCAACAATCTTTGTCGGTCTTTTTCAGTACCTCTTGCTCTTTCA
GCTTCTAGCCTTGTATGACGCTTATGATTATCAATATTTAATCAAACTCTTCCCTCTAGAGGAAAGTGCAAAGGTAAAAG
GAGCTAAACGAGTTATCACTAGCATTGGGGCAGTCATATTGCTCGTAGAATTATTGGCAGCTCTGCTATTCTTTAAAGAA
AAAATAATGGTCCTTTTTATCTTGCTTGTATACCTGATACTTTACGCAGTTTATCTACCTTACAAGCTTAAAGGATTGGT
TGACGAAAGGGCTTAA
ATGAGAGAAGTATTTGCTAAGCGCAAACTGGATTTTCGGAATCAGTGTGTCAAATATCTGCGCTATGTTTTGAATGACCA
CTTTGTTCTATTTTTAATGGTTTTCTTGGGTTTTACAGCGGTTCAATACAGCCAGTTGCTTCGCAATTTTCCTAAGAATC
ATTTGCCTATCTGGCTAGCCTTAGTCCTCCTATCACTGGGCTTGGTTTTTATGGGCAGGATTGCTACTTATCTTGAAAAG
CCAGATAGCCTCTTTCTTTTGGCTAAGGAAGAAGAAGTACGTGTCTATGTCGGCAAACAAAGGCGAAATTCTTTTATTCT
TTGGGGATTTTTGCAAACCTTGGCTTTGCTTCTGTTGGCTCCTCTTTTTCTAGCCTTAGGTGTGCCTATCTGGGGCTTTA
CTCTATATTGTTTGTTCCTATTTGCTTTGAAAGTTTTGGTATTTCAATGGAAAAGTAAGAAATTCTATTTGCAGGAAGGG
CTTGATTGGAAGTCTCTAATTGCCTACGAAGAGAGACGTAAACAGCGAATTTTGCAATTTTTTGCTCTCTTTACGAATGT
TAAGGGAATATCAAGTAGCGTAAAAAGACGAGCTTATTTAGATTTCTTGACCAACCGCCTGTCCAAGAACCAAGAGAAAG
TTTGGGACAATCTCTTCTTGCGCTCTTATTTGAGAAATGGGGACTTTTTTGCTCTTAGTCTACGTTTGTTAATTTTATCA
TTGCTGATTATTATTTTTCTACCTCAAAGCATGATTGCAACAATCTTTGTCGGTCTTTTTCAGTACCTCTTGCTCTTTCA
GCTTCTAGCCTTGTATGACGCTTATGATTATCAATATTTAATCAAACTCTTCCCTCTAGAGGAAAGTGCAAAGGTAAAAG
GAGCTAAACGAGTTATCACTAGCATTGGGGCAGTCATATTGCTCGTAGAATTATTGGCAGCTCTGCTATTCTTTAAAGAA
AAAATAATGGTCCTTTTTATCTTGCTTGTATACCTGATACTTTACGCAGTTTATCTACCTTACAAGCTTAAAGGATTGGT
TGACGAAAGGGCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus salivarius strain HSISS4 |
49.138 |
99.145 |
0.487 |
| pptB | Streptococcus thermophilus LMD-9 |
48.851 |
99.145 |
0.484 |