Detailed information NTG1138622

Bioinformatically predicted

Overview

• Name: vicR
• Type: Regulator
• Locus tag: DQM58_RS08275
• Genome accession: NZ_LS483363
• Coordinates: 1626807..1627514 (-)
• Length: 235 a.a.
• NCBI ID: WP_003055001.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414
• Function: repress comCDE expression; repress comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 1621807..1632514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM58_RS08250 (NCTC9414_01687)	pstB	1621893..1622645 (-)	753	WP_003055005.1	phosphate ABC transporter ATP-binding protein PstB	-
DQM58_RS08255 (NCTC9414_01688)	pstA	1622647..1623462 (-)	816	WP_015057412.1	phosphate ABC transporter permease PstA	-
DQM58_RS08260 (NCTC9414_01689)	pstC	1623455..1624318 (-)	864	WP_012766699.1	phosphate ABC transporter permease subunit PstC	-
DQM58_RS08265 (NCTC9414_01691)	-	1624436..1625311 (-)	876	WP_014612110.1	substrate-binding domain-containing protein	-
DQM58_RS08270 (NCTC9414_01692)	-	1625478..1626806 (-)	1329	WP_111681607.1	ATP-binding protein	-
DQM58_RS08275 (NCTC9414_01693)	vicR	1626807..1627514 (-)	708	WP_003055001.1	response regulator transcription factor	Regulator
DQM58_RS08280 (NCTC9414_01694)	-	1627601..1628083 (-)	483	WP_111681606.1	cupin domain-containing protein	-
DQM58_RS11085 (NCTC9414_01695)	-	1628258..1628413 (+)	156	WP_012766695.1	SPJ_0845 family protein	-
DQM58_RS08290 (NCTC9414_01696)	-	1628560..1629462 (+)	903	WP_015057408.1	permease	-
DQM58_RS08295 (NCTC9414_01697)	-	1629462..1630277 (+)	816	WP_046159497.1	TIGR03943 family protein	-
DQM58_RS08300 (NCTC9414_01698)	-	1630376..1631800 (-)	1425	WP_111681605.1	glycoside hydrolase family 1 protein	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 27491.70 Da
• Isoelectric Point: 5.4461

>NTDB_id=1138622 DQM58_RS08275 WP_003055001.1 1626807..1627514(-) (vicR) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414]
MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLDGIEVCKRLRAKGIKTPIMMV
SAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRRTSKEQQEDDTDDFRDDYRVFGALTVYPDRHEVYKADHLLS
LTPKEFELLLYLMKHPNMTLTRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKEL

Nucleotide

• Length: 708 bp

>NTDB_id=1138622 DQM58_RS08275 WP_003055001.1 1626807..1627514(-) (vicR) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414]
ATGACAAAACAAATCTTATTAGTGGATGATGAAGAACACATTTTGAGGCTACTGGATTATCATCTCGGTAAAGAAGGGTT
TTCCACACAATTGGTAACAGATGGCCGAAAAGCATTGACATTGGCAGAAACAGAGCCTTTTGACTTTATCCTACTGGATA
TTATGTTGCCTCAGTTAGACGGCATAGAAGTGTGTAAGCGACTGAGAGCTAAAGGAATAAAAACTCCGATTATGATGGTT
TCTGCTAAAAGTGATGAATTTGATAAGGTTTTGGCCTTGGAATTAGGAGCTGATGACTACCTGACTAAGCCTTTTAGCCC
TAGAGAATTGCTGGCGCGTGTCAAGGCTATTTTACGTCGAACCAGTAAAGAGCAGCAAGAAGATGACACAGATGATTTCA
GGGATGATTATCGGGTATTTGGGGCCCTGACCGTCTATCCAGACCGGCATGAGGTTTATAAGGCAGATCATTTATTGAGC
CTTACCCCAAAGGAATTTGAACTCTTGCTCTATCTTATGAAACATCCCAACATGACATTAACTAGGGAACGTTTACTTGA
ACGGATTTGGGGATATGATTTTGGACAAGAAACCCGTTTAGTGGATGTTCATATTGGCAAATTGAGAGATAAGATAGAGG
ATAATCCTAAAGACCCTCAATTTATTCAAACGATTAGAGGCTATGGGTATAAGTTTAAGGAGTTATAG

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (159-232)

• Response regulator receiver domain (Response_reg) (5-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
vicR	Streptococcus mutans UA159	49.145	99.574	0.489
micA	Streptococcus pneumoniae Cp1015	47.619	98.298	0.468
covR	Lactococcus lactis subsp. lactis strain DGCC12653	41.772	100	0.421
covR	Streptococcus salivarius strain HSISS4	40.506	100	0.409