Detailed information    

insolico Bioinformatically predicted

Overview


Name   cclA/cilC   Type   Machinery gene
Locus tag   DQM73_RS03250 Genome accession   NZ_LS483346
Coordinates   627461..628123 (-) Length   220 a.a.
NCBI ID   WP_002925573.1    Uniprot ID   A0A2X3VKV0
Organism   Streptococcus sanguinis strain NCTC11085     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 622461..633123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM73_RS03220 (NCTC11085_00628) - 622591..623154 (+) 564 WP_002925580.1 aminodeoxychorismate/anthranilate synthase component II -
  DQM73_RS03225 (NCTC11085_00629) trpD 623165..624169 (+) 1005 WP_002925579.1 anthranilate phosphoribosyltransferase -
  DQM73_RS03230 (NCTC11085_00630) trpC 624166..624933 (+) 768 WP_002925578.1 indole-3-glycerol phosphate synthase TrpC -
  DQM73_RS03235 (NCTC11085_00631) - 624920..625507 (+) 588 WP_002925577.1 phosphoribosylanthranilate isomerase -
  DQM73_RS03240 (NCTC11085_00632) trpB 625497..626720 (+) 1224 WP_002925576.1 tryptophan synthase subunit beta -
  DQM73_RS03245 (NCTC11085_00633) trpA 626713..627492 (+) 780 WP_002925574.1 tryptophan synthase subunit alpha -
  DQM73_RS03250 (NCTC11085_00634) cclA/cilC 627461..628123 (-) 663 WP_002925573.1 A24 family peptidase Machinery gene
  DQM73_RS03260 (NCTC11085_00635) - 628290..628805 (+) 516 WP_002898046.1 DNA starvation/stationary phase protection protein -
  DQM73_RS03265 (NCTC11085_00636) - 628898..629116 (+) 219 WP_002898045.1 YqgQ family protein -
  DQM73_RS03270 (NCTC11085_00637) - 629118..629498 (+) 381 WP_002904037.1 rhodanese-like domain-containing protein -
  DQM73_RS03275 (NCTC11085_00638) - 629588..629815 (+) 228 WP_002910330.1 hypothetical protein -
  DQM73_RS03280 (NCTC11085_00639) - 629890..630615 (-) 726 WP_002925572.1 16S rRNA pseudouridine(516) synthase -
  DQM73_RS03285 (NCTC11085_00640) typA 630795..632642 (+) 1848 WP_032908219.1 translational GTPase TypA -
  DQM73_RS03290 (NCTC11085_00641) - 632666..632935 (+) 270 WP_002898040.1 DUF3165 family protein -

Sequence


Protein


Download         Length: 220 a.a.        Molecular weight: 24649.92 Da        Isoelectric Point: 8.9310

>NTDB_id=1137692 DQM73_RS03250 WP_002925573.1 627461..628123(-) (cclA/cilC) [Streptococcus sanguinis strain NCTC11085]
MIHLYFFLLGTVFASFLGLVIDRFPERSVISPASHCNACGKRLAPRDLIPIFSQAMNRLRCRFCGDKIPLRYLFFECLLG
GLFLATSLSILSISQLLVVTMGLTLAIYDQREQQYPLMIWLVFQLLLLMTAGVNLLILFFLALGLLAFFYNLRIGAGDFL
FLASCSAIFSLTETLILIQIASFSGLACFCFKKKKDRLAFVPCLLFGAVVIISYKLLLLG

Nucleotide


Download         Length: 663 bp        

>NTDB_id=1137692 DQM73_RS03250 WP_002925573.1 627461..628123(-) (cclA/cilC) [Streptococcus sanguinis strain NCTC11085]
ATGATTCATCTATACTTTTTTCTACTTGGCACTGTCTTTGCTTCATTCCTAGGCTTGGTCATCGACCGCTTCCCAGAGCG
GTCTGTCATCTCTCCCGCTAGTCATTGCAATGCCTGCGGGAAAAGATTAGCACCGCGTGATTTGATTCCTATTTTTTCCC
AAGCCATGAACCGGCTTCGTTGCCGCTTCTGCGGAGACAAGATTCCCTTACGCTATTTATTTTTTGAATGTCTCTTGGGC
GGTCTTTTTCTGGCAACTTCTCTGAGCATTCTTTCCATTAGTCAATTATTGGTAGTCACCATGGGCTTAACCTTAGCTAT
CTACGATCAAAGAGAGCAGCAATACCCTTTGATGATCTGGTTGGTTTTTCAGCTTTTGCTGCTAATGACAGCAGGCGTTA
ATCTTCTCATACTCTTCTTTTTAGCCTTAGGACTTCTAGCCTTCTTTTATAATCTTCGTATTGGAGCTGGTGACTTTCTC
TTTCTGGCGTCTTGCTCAGCCATTTTCAGCCTGACGGAGACTCTCATCCTTATCCAAATCGCTAGTTTCTCTGGCCTCGC
CTGTTTCTGCTTTAAAAAGAAAAAAGACAGGCTAGCATTTGTACCTTGTCTTTTGTTTGGTGCGGTGGTGATTATTTCTT
ATAAGCTGCTGCTTCTTGGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2X3VKV0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis NCTC 12261

58.904

99.545

0.586

  cclA/cilC Streptococcus mitis SK321

57.991

99.545

0.577

  cclA/cilC Streptococcus pneumoniae Rx1

57.991

99.545

0.577

  cclA/cilC Streptococcus pneumoniae D39

57.991

99.545

0.577

  cclA/cilC Streptococcus pneumoniae R6

57.991

99.545

0.577

  cclA/cilC Streptococcus pneumoniae TIGR4

56.621

99.545

0.564


Multiple sequence alignment