Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQL21_RS03405 Genome accession   NZ_LS483343
Coordinates   648974..649777 (+) Length   267 a.a.
NCBI ID   WP_018029530.1    Uniprot ID   A0A2X3XZS8
Organism   Streptococcus ferus strain NCTC12278     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 643974..654777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL21_RS03380 (NCTC12278_00663) - 644351..645055 (-) 705 WP_018029525.1 amino acid ABC transporter permease -
  DQL21_RS03385 (NCTC12278_00664) - 645073..645888 (-) 816 WP_018029526.1 transporter substrate-binding domain-containing protein -
  DQL21_RS03390 (NCTC12278_00665) - 645885..646667 (-) 783 WP_018029527.1 amino acid ABC transporter ATP-binding protein -
  DQL21_RS03395 (NCTC12278_00666) vicR 646923..647630 (+) 708 WP_018029528.1 response regulator YycF Regulator
  DQL21_RS03400 (NCTC12278_00667) vicK 647623..648972 (+) 1350 WP_018029529.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL21_RS03405 (NCTC12278_00668) vicX 648974..649777 (+) 804 WP_018029530.1 MBL fold metallo-hydrolase Regulator
  DQL21_RS03410 (NCTC12278_00669) rnc 649880..650575 (+) 696 WP_018029531.1 ribonuclease III -
  DQL21_RS03415 (NCTC12278_00670) smc 650578..654123 (+) 3546 WP_018029532.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29908.85 Da        Isoelectric Point: 5.8475

>NTDB_id=1137595 DQL21_RS03405 WP_018029530.1 648974..649777(+) (vicX) [Streptococcus ferus strain NCTC12278]
MTEAAFKYSILASGSSGNAFYLESPQKKLLIDAGLSGKKITELMAEIDRHPQDLDAILVTHEHKDHIHGVGVLARKYQLD
IYANEKTWQAMDGMLGKIDSHQKHLFELGKTKIFGDLDIESFGVSHDAAAPQFYRFMKDGKSFVMLTDTGYVSDRMAGIV
ENADAYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNEDGAETMIRTLGHKTKRIYLGHLSKENNIKELAHMTMENAL
KQADLAVDHDFKVYDTAPDEATPLTDI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1137595 DQL21_RS03405 WP_018029530.1 648974..649777(+) (vicX) [Streptococcus ferus strain NCTC12278]
ATGACAGAAGCTGCCTTTAAATATAGTATTCTCGCCTCAGGTTCGTCAGGCAATGCTTTCTATTTAGAAAGCCCTCAAAA
GAAACTTCTCATTGATGCGGGGTTATCTGGCAAAAAAATAACGGAATTGATGGCTGAGATTGACCGTCATCCTCAAGATT
TAGATGCGATTTTAGTGACCCATGAACATAAGGATCATATCCATGGCGTGGGGGTCTTGGCCAGAAAATATCAATTAGAT
ATCTATGCCAATGAGAAAACCTGGCAGGCTATGGACGGCATGCTAGGTAAGATAGACAGCCATCAGAAGCACCTTTTTGA
ACTTGGAAAAACCAAGATATTTGGCGATCTTGACATTGAAAGTTTTGGGGTCAGTCATGATGCAGCTGCTCCCCAGTTTT
ATCGCTTTATGAAAGATGGTAAAAGTTTTGTAATGCTGACAGATACCGGCTATGTGAGTGACAGAATGGCAGGGATTGTA
GAGAATGCGGATGCTTACTTAATTGAGTCCAATCATGACATCGAAATTCTACGTTCTGGTGCCTATCCTTGGAGCTTGAA
GCAGAGAATCTTATCTGACCAGGGGCATCTGTCTAATGAAGATGGGGCAGAGACCATGATTCGGACGCTTGGTCATAAGA
CAAAACGCATCTATCTGGGCCATCTGAGTAAAGAAAATAATATCAAAGAGTTGGCACACATGACGATGGAAAATGCTCTC
AAACAGGCTGACTTGGCGGTTGATCATGATTTTAAGGTTTACGATACAGCCCCTGATGAGGCGACGCCGTTGACTGATAT
TTGA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X3XZS8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

82.397

100

0.824

Multiple sequence alignment