Detailed information NTG1137532

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DQL56_RS06545
• Genome accession: NZ_LS483342
• Coordinates: 1244363..1245310 (-)
• Length: 315 a.a.
• NCBI ID: WP_070507948.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain NCTC11930
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1239363..1250310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL56_RS06525 (NCTC11930_01294)	prsA	1239950..1240879 (-)	930	WP_000857822.1	peptidylprolyl isomerase PrsA	-
DQL56_RS06530 (NCTC11930_01295)	-	1240940..1241647 (-)	708	WP_000250853.1	O-methyltransferase	-
DQL56_RS06535 (NCTC11930_01296)	-	1241721..1242347 (-)	627	WP_000736935.1	HAD hydrolase-like protein	-
DQL56_RS06540 (NCTC11930_01297)	pepF	1242542..1244347 (-)	1806	WP_001282902.1	oligoendopeptidase F	Regulator
DQL56_RS06545 (NCTC11930_01298)	coiA	1244363..1245310 (-)	948	WP_070507948.1	competence protein CoiA	Machinery gene
DQL56_RS06550 (NCTC11930_01299)	-	1245362..1246513 (-)	1152	WP_001086200.1	MFS transporter	-
DQL56_RS06560 (NCTC11930_01300)	-	1246586..1247305 (-)	720	WP_001234956.1	16S rRNA pseudouridine(516) synthase	-
DQL56_RS06565 (NCTC11930_01301)	-	1247401..1248357 (+)	957	WP_000523788.1	glutathione S-transferase family protein	-
DQL56_RS06570 (NCTC11930_01302)	-	1248429..1249130 (-)	702	WP_001263956.1	glucosamine-6-phosphate deaminase	-
DQL56_RS06575 (NCTC11930_01303)	-	1249281..1249961 (-)	681	WP_000656582.1	VIT family protein	-

Sequence

Protein

• Length: 315 a.a.
• Molecular weight: 37797.53 Da
• Isoelectric Point: 9.5842

>NTDB_id=1137532 DQL56_RS06545 WP_070507948.1 1244363..1245310(-) (coiA) [Streptococcus agalactiae strain NCTC11930]
MLIAKDKQGNLINLLESHPGKGQYFCPTCCSAVRLKAGRIMRRHFAHISLKNCQFYHENESNEHLQLKAKLYMSLSRENE
TMLEHHLPEINQIADLFVNETLALEVQCSRLSEQRLRERTKAYLQADFQVRWLLGEKLWLKHRLTNLHKQFLQFSQSIGF
HIWELDLRLEVLRLKYLIYEDLRGHVYYLSKTCPLSGDVLAFLKWPYQSKNLNFYKVKQDRNIRDYVRQQLRYGNQFWLR
KQEKAYLSGQNLLTQELMMFFPQIQPPRVDTDFCQITNSLTSFYQNFTNYYQKNKNNLDQTLYSPVFYDKIVTKN

Nucleotide

• Length: 948 bp

>NTDB_id=1137532 DQL56_RS06545 WP_070507948.1 1244363..1245310(-) (coiA) [Streptococcus agalactiae strain NCTC11930]
ATGTTAATTGCTAAAGACAAACAAGGAAATTTAATTAATCTACTCGAGTCTCATCCGGGAAAGGGACAGTATTTTTGTCC
AACTTGTTGTTCAGCTGTAAGGTTAAAGGCAGGTCGAATCATGAGAAGACACTTTGCACATATTAGTCTAAAAAATTGTC
AGTTTTATCATGAAAATGAGTCTAATGAGCACTTGCAATTAAAAGCAAAGTTATATATGAGTTTAAGTAGAGAGAATGAA
ACTATGCTCGAGCATCATTTGCCAGAAATTAATCAGATTGCAGATTTATTTGTGAATGAGACATTGGCTTTAGAAGTTCA
GTGTAGCCGACTATCAGAGCAGCGACTCAGGGAACGAACAAAAGCATATCTACAGGCAGACTTTCAAGTGAGATGGTTAC
TAGGGGAAAAACTCTGGTTAAAGCATCGTTTAACAAATCTACATAAACAATTTTTACAATTTTCTCAAAGTATCGGATTT
CATATTTGGGAGTTAGATTTGAGGTTAGAAGTACTGAGACTAAAATATTTGATTTACGAAGATTTACGCGGACATGTCTA
TTACTTAAGTAAAACTTGCCCTCTTAGTGGAGACGTTCTAGCATTTTTGAAGTGGCCATACCAATCAAAAAATCTAAATT
TTTATAAGGTTAAACAAGACAGAAATATCAGAGATTATGTGCGTCAGCAGTTACGCTATGGCAATCAATTTTGGTTACGA
AAACAAGAAAAGGCCTACCTTTCTGGTCAGAATCTATTGACCCAAGAGCTAATGATGTTTTTTCCTCAAATACAGCCACC
ACGTGTAGATACTGATTTTTGTCAAATAACAAATTCTCTAACATCGTTTTATCAGAATTTTACAAATTATTATCAAAAAA
ATAAGAATAACTTAGACCAAACACTTTATTCCCCTGTATTTTATGATAAAATAGTCACTAAGAATTAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-299)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	48.734	100	0.489
coiA	Streptococcus pneumoniae Rx1	48.734	100	0.489
coiA	Streptococcus pneumoniae D39	48.734	100	0.489
coiA	Streptococcus pneumoniae R6	48.734	100	0.489
coiA	Streptococcus mitis NCTC 12261	48.734	100	0.489
coiA	Lactococcus lactis subsp. cremoris KW2	39.752	100	0.406