Detailed information NTG1137374

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: DQL34_RS08005
• Genome accession: NZ_LS483339
• Coordinates: 1510198..1511124 (-)
• Length: 308 a.a.
• NCBI ID: WP_084828982.1
• Uniprot ID: A0A0E2Q2N6
• Organism: Streptococcus thermophilus strain NCTC12958
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1505198..1516124

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL34_RS07975 (NCTC12958_01664)	-	1505275..1506069 (-)	795	WP_011681412.1	HAD-IIB family hydrolase	-
DQL34_RS07980 (NCTC12958_01665)	-	1506254..1506631 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
DQL34_RS07985 (NCTC12958_01666)	-	1506636..1507334 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
DQL34_RS07990 (NCTC12958_01667)	-	1507346..1508131 (+)	786	WP_011681414.1	hypothetical protein	-
DQL34_RS07995 (NCTC12958_01668)	amiF	1508181..1509110 (-)	930	WP_082245810.1	ATP-binding cassette domain-containing protein	Regulator
DQL34_RS08000 (NCTC12958_01669)	amiE	1509103..1510188 (-)	1086	WP_084828981.1	ABC transporter ATP-binding protein	Regulator
DQL34_RS08005 (NCTC12958_01670)	amiD	1510198..1511124 (-)	927	WP_084828982.1	oligopeptide ABC transporter permease OppC	Regulator
DQL34_RS08010 (NCTC12958_01671)	amiC	1511124..1512617 (-)	1494	WP_064355564.1	ABC transporter permease	Regulator
DQL34_RS08015 (NCTC12958_01672)	amiA3	1512678..1514651 (-)	1974	WP_111679665.1	peptide ABC transporter substrate-binding protein	Regulator
DQL34_RS08020	-	1514887..1515077 (-)	191	Protein_1520	IS3 family transposase	-
DQL34_RS12505	-	1515071..1515481 (-)	411	Protein_1521	ATP-binding cassette domain-containing protein	-
DQL34_RS12510 (NCTC12958_01675)	-	1515513..1515827 (-)	315	Protein_1522	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34664.83 Da
• Isoelectric Point: 9.7054

>NTDB_id=1137374 DQL34_RS08005 WP_084828982.1 1510198..1511124(-) (amiD) [Streptococcus thermophilus strain NCTC12958]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIIGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1137374 DQL34_RS08005 WP_084828982.1 1510198..1511124(-) (amiD) [Streptococcus thermophilus strain NCTC12958]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTTTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAATGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCTCTCTTTATTA
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

3D structure

• AlphaFold DB: A0A0E2Q2N6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	99.026	100	0.99
amiD	Streptococcus thermophilus LMD-9	99.026	100	0.99
amiD	Streptococcus salivarius strain HSISS4	96.104	100	0.961