Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQL28_RS05660 Genome accession   NZ_LS483334
Coordinates   1123135..1123329 (-) Length   64 a.a.
NCBI ID   WP_023079070.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12050     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1118135..1128329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL28_RS05640 (NCTC12050_01122) - 1119945..1121153 (-) 1209 WP_161737260.1 CCA tRNA nucleotidyltransferase -
  DQL28_RS05645 (NCTC12050_01123) - 1121278..1122126 (-) 849 WP_023079077.1 DegV family protein -
  DQL28_RS05650 (NCTC12050_01124) - 1122126..1122506 (-) 381 WP_002985011.1 DUF1149 family protein -
  DQL28_RS05655 (NCTC12050_01125) - 1122708..1122910 (-) 203 Protein_1038 nucleoside-diphosphate kinase -
  DQL28_RS05660 prx 1123135..1123329 (-) 195 WP_023079070.1 hypothetical protein Regulator
  DQL28_RS05665 (NCTC12050_01126) - 1123391..1124416 (+) 1026 WP_002990201.1 IdeS/Mac family cysteine endopeptidase -
  DQL28_RS05670 - 1124529..1124801 (+) 273 WP_374153116.1 exotoxin beta-grasp domain-containing protein -
  DQL28_RS05675 (NCTC12050_01127) - 1125026..1125316 (+) 291 Protein_1042 IS3 family transposase -
  DQL28_RS05680 (NCTC12050_01128) - 1125373..1126080 (-) 708 WP_002990206.1 glycoside hydrolase family 73 protein -
  DQL28_RS05685 (NCTC12050_01129) - 1126232..1126831 (-) 600 WP_010922159.1 glycoside hydrolase family 73 protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7477.69 Da        Isoelectric Point: 5.8151

>NTDB_id=1137086 DQL28_RS05660 WP_023079070.1 1123135..1123329(-) (prx) [Streptococcus pyogenes strain NCTC12050]
MQVFKIIFNKIKQAIDNGDITRDTVVVVLKNGRFFDDMLLHEEVSNRRAVIEERGEEALMKLDK

Nucleotide


Download         Length: 195 bp        

>NTDB_id=1137086 DQL28_RS05660 WP_023079070.1 1123135..1123329(-) (prx) [Streptococcus pyogenes strain NCTC12050]
TTGCAAGTTTTTAAAATAATTTTTAATAAAATTAAACAAGCGATTGACAATGGAGATATCACAAGAGATACAGTAGTGGT
TGTGCTTAAAAATGGACGGTTTTTTGATGATATGTTGCTGCATGAGGAAGTGAGCAATAGGAGAGCTGTGATAGAAGAAA
GAGGGGAAGAAGCGTTGATGAAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

52.542

92.188

0.484
  prx Streptococcus pyogenes MGAS315

50.847

92.188

0.469
  prx Streptococcus pyogenes MGAS8232

45.763

92.188

0.422
  prx Streptococcus pyogenes MGAS315

44.068

92.188

0.406

Multiple sequence alignment