Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   DQL47_RS05015 Genome accession   NZ_LS483328
Coordinates   1042376..1043686 (+) Length   436 a.a.
NCBI ID   WP_111690094.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC12090     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1037376..1048686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL47_RS05000 (NCTC12090_01002) phoU 1037866..1038519 (+) 654 WP_012678018.1 phosphate signaling complex protein PhoU -
  DQL47_RS05005 (NCTC12090_01003) - 1038753..1041290 (+) 2538 WP_111690093.1 M1 family metallopeptidase -
  DQL47_RS05010 (NCTC12090_01004) ciaR 1041709..1042383 (+) 675 WP_111678058.1 response regulator transcription factor Regulator
  DQL47_RS05015 (NCTC12090_01005) ciaH 1042376..1043686 (+) 1311 WP_111690094.1 sensor histidine kinase Regulator
  DQL47_RS05020 (NCTC12090_01006) - 1044070..1044504 (+) 435 WP_012678015.1 hypothetical protein -
  DQL47_RS10255 (NCTC12090_01007) - 1044586..1044762 (+) 177 WP_014622814.1 hypothetical protein -
  DQL47_RS05025 (NCTC12090_01008) - 1044778..1045185 (+) 408 WP_014622815.1 hypothetical protein -
  DQL47_RS05030 (NCTC12090_01009) - 1045195..1045440 (+) 246 WP_111690095.1 hypothetical protein -
  DQL47_RS05035 (NCTC12090_01010) - 1045611..1045994 (+) 384 WP_041790456.1 hypothetical protein -
  DQL47_RS05040 (NCTC12090_01011) - 1045991..1046236 (+) 246 WP_111690096.1 hypothetical protein -
  DQL47_RS05045 (NCTC12090_01012) - 1046252..1046674 (+) 423 WP_111690097.1 hypothetical protein -
  DQL47_RS05050 (NCTC12090_01013) - 1046843..1047169 (+) 327 WP_111690561.1 hypothetical protein -
  DQL47_RS05055 (NCTC12090_01014) - 1047201..1048381 (+) 1181 Protein_962 hypothetical protein -

Sequence

Protein


Download         Length: 436 a.a.        Molecular weight: 49688.36 Da        Isoelectric Point: 9.5548

>NTDB_id=1136743 DQL47_RS05015 WP_111690094.1 1042376..1043686(+) (ciaH) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
MNKLKKELLSDNYTHFFHFFAIFTGIFVVMTIIILQIMRFSVYSTVDSSLISVGQNASNYANRTMARISSFYFDAENNLI
QALPELEASKSLGSSTTNMDIILFSANGTILNSFDAFSNYQSFRLDKSQLNNIVTTQLMNFYGQKEKYHTLTVKVHIKNY
PAVAYMMAVVNVQQLDTANERYEQIIIMVMIVFWLISILASIYLAKWSRKPIMESYAKQKMFVENASHELRTPLAVLQNR
LESLFRKPNETILDNSEHIASSLDEVRNMRILTTNLLNLARRDDGIKPQLVDVDAAFFDTVFENYQLVAEESGKQFISAN
QINRPLKTDKALLKQLMTILFDNAIKYTDHNGVVEVKVRTTDKHLLISVIDNGPGIKDDDKKKIFDRFYRVDKARTRQKG
GFGLGLALAQQIVTSLKGTITVSDNKPTGIIFEVKL

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=1136743 DQL47_RS05015 WP_111690094.1 1042376..1043686(+) (ciaH) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
ATGAATAAACTAAAAAAAGAATTATTGTCCGATAATTATACACATTTTTTTCATTTCTTTGCTATTTTTACAGGCATTTT
TGTTGTCATGACTATCATTATTTTGCAAATCATGAGGTTTAGTGTCTATTCCACAGTAGACAGCAGTCTCATTTCGGTCG
GTCAAAATGCCAGCAACTATGCCAATAGGACCATGGCGAGAATATCTTCCTTTTATTTTGATGCAGAAAATAACCTTATT
CAGGCTCTTCCTGAACTGGAAGCGTCAAAATCACTTGGCTCCTCCACCACTAATATGGATATTATTTTATTTAGTGCTAA
TGGGACGATATTGAACTCCTTTGACGCTTTCTCTAATTACCAAAGCTTTCGTTTAGACAAAAGCCAGCTCAATAACATTG
TCACAACACAGCTGATGAATTTTTATGGGCAAAAGGAGAAATACCATACCCTAACTGTTAAGGTTCACATTAAAAACTAT
CCAGCAGTGGCTTATATGATGGCAGTGGTTAATGTTCAGCAGCTGGATACTGCTAATGAGCGCTATGAACAGATTATTAT
CATGGTTATGATTGTCTTTTGGTTAATTTCGATTTTGGCCAGTATTTATTTGGCTAAGTGGAGCAGAAAGCCAATTATGG
AGAGCTATGCCAAGCAAAAAATGTTTGTAGAAAATGCCAGTCATGAGCTTAGGACTCCTTTAGCGGTGCTGCAAAATCGT
TTGGAATCGCTGTTTAGAAAGCCTAACGAAACCATTTTAGACAATAGCGAGCATATTGCGTCAAGCCTAGATGAGGTTCG
TAATATGAGAATATTAACCACTAATTTGTTAAACCTAGCGAGACGTGATGATGGCATTAAGCCGCAGCTGGTTGATGTTG
ATGCAGCCTTTTTTGACACTGTTTTTGAAAATTATCAATTAGTTGCAGAAGAATCAGGCAAGCAGTTTATCTCAGCTAAT
CAGATCAATAGGCCCTTAAAGACGGATAAGGCTTTGCTCAAGCAGCTGATGACCATTTTGTTTGATAATGCGATCAAATA
CACTGATCATAACGGTGTGGTTGAGGTCAAGGTTAGAACGACCGATAAGCATTTATTGATTTCTGTTATTGATAATGGCC
CAGGGATCAAGGATGATGATAAGAAAAAGATTTTTGATCGCTTTTACCGAGTGGATAAGGCAAGGACACGCCAAAAAGGA
GGCTTTGGACTCGGATTGGCCTTAGCGCAGCAGATCGTTACCTCATTAAAAGGAACGATTACCGTCAGTGATAATAAGCC
TACCGGTATCATATTTGAAGTAAAATTATAG

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(220-285)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(329-435)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

57.895

100

0.58
  ciaH Streptococcus pneumoniae Rx1

51.376

100

0.514
  ciaH Streptococcus pneumoniae D39

51.376

100

0.514
  ciaH Streptococcus pneumoniae R6

51.376

100

0.514
  ciaH Streptococcus pneumoniae TIGR4

51.376

100

0.514

Multiple sequence alignment