Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQL59_RS07380 | Genome accession | NZ_LS483326 |
| Coordinates | 1461048..1462001 (-) | Length | 317 a.a. |
| NCBI ID | WP_111681329.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain NCTC12045 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1456048..1467001
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL59_RS07345 (NCTC12045_01455) | - | 1456267..1456584 (-) | 318 | WP_002986515.1 | thioredoxin family protein | - |
| DQL59_RS07350 (NCTC12045_01456) | - | 1456581..1456865 (-) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| DQL59_RS07360 (NCTC12045_01457) | pepA | 1457330..1458397 (+) | 1068 | WP_023610097.1 | glutamyl aminopeptidase | - |
| DQL59_RS07365 (NCTC12045_01458) | proC | 1458445..1459215 (+) | 771 | WP_002992745.1 | pyrroline-5-carboxylate reductase | - |
| DQL59_RS07370 | - | 1459298..1459606 (-) | 309 | WP_041174321.1 | hypothetical protein | - |
| DQL59_RS07375 (NCTC12045_01459) | - | 1459793..1460989 (-) | 1197 | WP_111681328.1 | acetate kinase | - |
| DQL59_RS07380 (NCTC12045_01460) | comYH | 1461048..1462001 (-) | 954 | WP_111681329.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQL59_RS07385 (NCTC12045_01461) | comGG | 1462099..1462425 (-) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| DQL59_RS07390 (NCTC12045_01462) | comYF | 1462409..1462843 (-) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQL59_RS07395 (NCTC12045_01463) | comGE | 1462836..1463120 (-) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | - |
| DQL59_RS07400 (NCTC12045_01464) | comGD | 1463077..1463505 (-) | 429 | WP_111681330.1 | competence type IV pilus minor pilin ComGD | - |
| DQL59_RS07405 (NCTC12045_01465) | comYC | 1463480..1463806 (-) | 327 | WP_111681331.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQL59_RS07410 (NCTC12045_01466) | comYB | 1463808..1464842 (-) | 1035 | WP_227874808.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQL59_RS07415 (NCTC12045_01467) | comYA | 1464778..1465716 (-) | 939 | WP_002987773.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQL59_RS07420 (NCTC12045_01468) | - | 1465809..1466174 (-) | 366 | WP_002986560.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36026.17 Da Isoelectric Point: 4.7866
>NTDB_id=1136644 DQL59_RS07380 WP_111681329.1 1461048..1462001(-) (comYH) [Streptococcus pyogenes strain NCTC12045]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGTEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPNSIFGHPSNAKSIIVLQKQIDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGTEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPNSIFGHPSNAKSIIVLQKQIDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=1136644 DQL59_RS07380 WP_111681329.1 1461048..1462001(-) (comYH) [Streptococcus pyogenes strain NCTC12045]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGACTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGATACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACGCTACCAAATTCTATTTTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTACAAAAACAAATAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGACTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGATACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACGCTACCAAATTCTATTTTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTACAAAAACAAATAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
65.823 |
99.685 |
0.656 |
| comYH | Streptococcus mutans UA140 |
65.506 |
99.685 |
0.653 |