Detailed information NTG1136197

Bioinformatically predicted

Overview

• Name: vicR
• Type: Regulator
• Locus tag: DQM44_RS03095
• Genome accession: NZ_LS483318
• Coordinates: 559098..559805 (+)
• Length: 235 a.a.
• NCBI ID: WP_003055001.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370
• Function: repress comCDE expression; repress comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 554098..564805

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM44_RS03065 (NCTC5370_00632)	-	554125..555549 (+)	1425	WP_011527513.1	glycoside hydrolase family 1 protein	-
DQM44_RS03070 (NCTC5370_00633)	-	555648..556463 (-)	816	WP_022554376.1	TIGR03943 family protein	-
DQM44_RS03075 (NCTC5370_00634)	-	556463..557365 (-)	903	WP_002990594.1	permease	-
DQM44_RS10465 (NCTC5370_00635)	-	557512..557667 (-)	156	WP_012766695.1	SPJ_0845 family protein	-
DQM44_RS03085 (NCTC5370_00636)	-	557746..558357 (-)	612	WP_015016795.1	NUDIX hydrolase N-terminal domain-containing protein	-
DQM44_RS03090 (NCTC5370_00637)	-	558535..559011 (+)	477	WP_172449190.1	cupin domain-containing protein	-
DQM44_RS03095 (NCTC5370_00638)	vicR	559098..559805 (+)	708	WP_003055001.1	response regulator transcription factor	Regulator
DQM44_RS03100 (NCTC5370_00639)	-	559806..561134 (+)	1329	WP_022554378.1	ATP-binding protein	-
DQM44_RS03105 (NCTC5370_00640)	-	561301..562176 (+)	876	WP_022554379.1	substrate-binding domain-containing protein	-
DQM44_RS03110 (NCTC5370_00641)	pstC	562293..563156 (+)	864	WP_012766699.1	phosphate ABC transporter permease subunit PstC	-
DQM44_RS03115 (NCTC5370_00642)	pstA	563149..563964 (+)	816	WP_003060853.1	phosphate ABC transporter permease PstA	-
DQM44_RS03120 (NCTC5370_00643)	pstB	563966..564718 (+)	753	WP_003055005.1	phosphate ABC transporter ATP-binding protein PstB	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 27491.70 Da
• Isoelectric Point: 5.4461

>NTDB_id=1136197 DQM44_RS03095 WP_003055001.1 559098..559805(+) (vicR) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLDGIEVCKRLRAKGIKTPIMMV
SAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRRTSKEQQEDDTDDFRDDYRVFGALTVYPDRHEVYKADHLLS
LTPKEFELLLYLMKHPNMTLTRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKEL

Nucleotide

• Length: 708 bp

>NTDB_id=1136197 DQM44_RS03095 WP_003055001.1 559098..559805(+) (vicR) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
ATGACAAAACAAATCTTATTAGTGGATGATGAAGAACACATTTTGAGGCTACTGGATTATCATCTCGGTAAAGAAGGGTT
TTCCACACAATTGGTAACAGATGGCCGAAAAGCATTGACATTGGCAGAAACAGAGCCTTTTGACTTTATCCTACTGGATA
TTATGTTGCCTCAGTTAGACGGCATAGAAGTGTGTAAGCGACTGAGAGCTAAAGGAATAAAAACTCCGATTATGATGGTT
TCTGCTAAAAGTGATGAATTTGATAAGGTTTTGGCCTTGGAATTAGGAGCTGATGACTACCTGACTAAGCCTTTTAGCCC
TAGAGAATTGCTGGCGCGTGTCAAGGCTATTTTACGTCGAACCAGTAAAGAGCAGCAAGAAGATGACACAGATGATTTCA
GGGATGATTATCGGGTATTTGGGGCCCTGACCGTCTATCCAGACCGGCATGAGGTTTATAAGGCAGATCATTTATTGAGC
CTTACCCCAAAGGAATTTGAACTCTTGCTCTATCTTATGAAACATCCCAACATGACATTAACTAGGGAACGTTTACTTGA
ACGGATTTGGGGATATGATTTTGGACAAGAAACCCGTTTAGTGGATGTTCATATTGGCAAATTGAGAGATAAGATAGAGG
ATAATCCTAAAGACCCTCAATTTATTCAAACGATTAGAGGCTATGGGTATAAGTTTAAGGAGTTATAG

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (159-232)

• Response regulator receiver domain (Response_reg) (5-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
vicR	Streptococcus mutans UA159	49.145	99.574	0.489
micA	Streptococcus pneumoniae Cp1015	47.619	98.298	0.468
covR	Lactococcus lactis subsp. lactis strain DGCC12653	41.772	100	0.421
covR	Streptococcus salivarius strain HSISS4	40.506	100	0.409