Detailed information NTG1131200

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: H1X08_RS03105
• Genome accession: NZ_LR822025
• Coordinates: 603063..603989 (+)
• Length: 308 a.a.
• NCBI ID: WP_180482512.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_961
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 598063..608989

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1X08_RS11215	-	598206..598643 (+)	438	Protein_579	TatD family hydrolase	-
H1X08_RS11220 (STHERMO_0674)	-	598683..599107 (+)	425	Protein_580	ATP-binding cassette domain-containing protein	-
H1X08_RS03090 (STHERMO_0676)	-	599104..599293 (+)	190	Protein_581	IS3 family transposase	-
H1X08_RS03095 (STHERMO_0677)	amiA3	599528..601504 (+)	1977	WP_180482511.1	peptide ABC transporter substrate-binding protein	Regulator
H1X08_RS03100 (STHERMO_0678)	amiC	601570..603063 (+)	1494	WP_164135541.1	ABC transporter permease	Regulator
H1X08_RS03105 (STHERMO_0679)	amiD	603063..603989 (+)	927	WP_180482512.1	oligopeptide ABC transporter permease OppC	Regulator
H1X08_RS03110 (STHERMO_0680)	amiE	603999..605084 (+)	1086	WP_179972089.1	ABC transporter ATP-binding protein	Regulator
H1X08_RS03115 (STHERMO_0681)	amiF	605077..606003 (+)	927	WP_179972088.1	ATP-binding cassette domain-containing protein	Regulator
H1X08_RS03120 (STHERMO_0682)	-	606056..606841 (-)	786	WP_180482513.1	ABC transporter permease	-
H1X08_RS03125 (STHERMO_0684)	-	606853..607553 (-)	701	Protein_588	ABC transporter ATP-binding protein	-
H1X08_RS03130 (STHERMO_0685)	-	607558..607935 (-)	378	WP_180482514.1	GntR family transcriptional regulator	-
H1X08_RS03135 (STHERMO_0686)	-	608120..608914 (+)	795	WP_180482515.1	HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34614.77 Da
• Isoelectric Point: 9.7054

>NTDB_id=1131200 H1X08_RS03105 WP_180482512.1 603063..603989(+) (amiD) [Streptococcus thermophilus isolate STH_CIRM_961]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATLLNVIIGSLVGAVWGISKTFDMIMMEIYNIISNIPPLLVIIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1131200 H1X08_RS03105 WP_180482512.1 603063..603989(+) (amiD) [Streptococcus thermophilus isolate STH_CIRM_961]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAGTCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAACGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCCTCCTGAATGTTATAATTGGTTCGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCCCTCTCCTTGTAATTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	98.052	100	0.981
amiD	Streptococcus thermophilus LMD-9	98.052	100	0.981
amiD	Streptococcus salivarius strain HSISS4	95.455	100	0.955