Detailed information NTG1129698

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: G3R43_RS29000
• Genome accession: NZ_LR739069
• Coordinates: 6191354..6192418 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6186354..6197418

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3R43_RS28975 (PERCYII40_5786)	aroK	6186889..6187407 (-)	519	WP_003095833.1	shikimate kinase AroK	-
G3R43_RS28980 (PERCYII40_5787)	pilQ	6187419..6189563 (-)	2145	WP_162291230.1	type 4a pilus secretin PilQ	Machinery gene
G3R43_RS28985 (PERCYII40_5788)	pilP	6189617..6190141 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
G3R43_RS28990 (PERCYII40_5789)	pilO	6190138..6190761 (-)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
G3R43_RS28995 (PERCYII40_5790)	pilN	6190758..6191354 (-)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
G3R43_RS29000 (PERCYII40_5791)	pilM	6191354..6192418 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
G3R43_RS29005 (PERCYII40_5792)	-	6192603..6195074 (+)	2472	WP_003125627.1	penicillin-binding protein 1A	-
G3R43_RS29010 (PERCYII40_5793)	-	6195170..6196438 (-)	1269	WP_003095842.1	malic enzyme	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=1129698 G3R43_RS29000 WP_003110888.1 6191354..6192418(-) (pilM) [Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1129698 G3R43_RS29000 WP_003110888.1 6191354..6192418(-) (pilM) [Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCGCGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGGCTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAGGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466