Detailed information NTG1129694

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: G3R43_RS26385
• Genome accession: NZ_LR739069
• Coordinates: 5604362..5605699 (+)
• Length: 445 a.a.
• NCBI ID: WP_003110427.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5599362..5610699

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3R43_RS26360 (PERCYII40_5258)	pgeF	5599505..5600233 (-)	729	WP_003094684.1	peptidoglycan editing factor PgeF	-
G3R43_RS26365 (PERCYII40_5259)	rluD	5600230..5601192 (-)	963	WP_003094686.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
G3R43_RS26370 (PERCYII40_5260)	-	5601338..5602363 (+)	1026	WP_003102590.1	outer membrane protein assembly factor BamD	-
G3R43_RS26375 (PERCYII40_5261)	-	5602520..5602765 (+)	246	WP_014603563.1	PP0621 family protein	-
G3R43_RS26380 (PERCYII40_5262)	pilS	5602755..5604347 (+)	1593	WP_003110428.1	two-component system sensor histidine kinase PilS	Regulator
G3R43_RS26385 (PERCYII40_5263)	pilR	5604362..5605699 (+)	1338	WP_003110427.1	two-component system response regulator PilR	Regulator
G3R43_RS26390 (PERCYII40_5264)	thiO	5605745..5606839 (-)	1095	WP_023096126.1	glycine oxidase ThiO	-
G3R43_RS26395 (PERCYII40_5265)	-	5606974..5607483 (+)	510	WP_009316266.1	GspH/FimT family pseudopilin	-
G3R43_RS26400 (PERCYII40_5266)	-	5607589..5608095 (+)	507	WP_003110423.1	GspH/FimT family pseudopilin	-
G3R43_RS26405 (PERCYII40_5267)	pilV	5608086..5608643 (+)	558	WP_003094697.1	type 4a pilus minor pilin PilV	Machinery gene
G3R43_RS26410 (PERCYII40_5268)	pilW	5608640..5609464 (+)	825	WP_023096127.1	type 4a pilus minor pilin PilW	-
G3R43_RS26415 (PERCYII40_5269)	pilX	5609461..5610048 (+)	588	WP_003094700.1	type 4a pilus minor pilin PilX	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49723.03 Da
• Isoelectric Point: 5.8638

>NTDB_id=1129694 G3R43_RS26385 WP_003110427.1 5604362..5605699(+) (pilR) [Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40]
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPFDLCLTDMRLPDGSGLDLVQYIQQRHPQTPVAM
ITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATALRLRNPEAEEAPVDNRLLGESPPMRALRNQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRIERPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAASGGTLFLDEVADLP
MAMQVKLLRAIQEKAVRAVGGQQEVAVDVRILCATHKDLAAEVGAGRFRQDLYYRLNVIELRVPPLRERREDIPLLADRI
LKRLAGDTGLPAARLTGDAQEKLKNYRFPGNVRELENMLERAYTLCEDDQIQPHDLRLADAPGASQEGAASLSEIDNLED
YLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=1129694 G3R43_RS26385 WP_003110427.1 5604362..5605699(+) (pilR) [Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40]
ATGAGCCGACAAAAAGCCCTGATCGTCGACGATGAACCGGATATCCGCGAACTGCTGGAAATCACTCTCGGCCGCATGAA
GCTGGACACCCGCAGCGCCCGCAACGTCAAGGAAGCCCGCGAGTTGCTGGCCCGCGAGCCGTTCGACCTGTGCCTCACCG
ACATGCGCCTGCCGGACGGCAGCGGCCTCGATCTGGTCCAGTACATCCAGCAGCGCCATCCACAGACCCCGGTGGCCATG
ATCACCGCGTACGGCAGCCTGGACACCGCGATCCAGGCGCTCAAGGCCGGTGCCTTCGACTTCCTCACCAAACCGGTCGA
CCTCGGTCGCTTGCGGGAGCTAGTGGCAACCGCCCTGCGCTTGCGCAACCCGGAAGCCGAGGAAGCGCCGGTGGACAACC
GCCTGCTCGGCGAGTCGCCGCCGATGCGCGCCCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCGCCGGTCTAC
ATCAGTGGCGAGTCCGGCAGCGGCAAGGAACTGGTGGCGCGCCTGATCCACGAGCAGGGGCCACGTATCGAGCGGCCGTT
CGTGCCGGTGAACTGCGGCGCGATTCCCTCCGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCACTG
GCGCTATCGAAGACAAGCAGGGCCTGTTCCAGGCCGCCAGCGGTGGCACCCTGTTCCTCGACGAAGTCGCCGACCTGCCG
ATGGCCATGCAGGTCAAACTGCTCCGGGCGATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTCGCCGT
CGACGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCGCCGAAGTCGGCGCCGGGCGCTTCCGCCAGGACCTCTACT
ACCGCCTCAACGTCATCGAGCTGCGCGTACCGCCGCTGCGCGAACGCCGCGAGGACATCCCGCTGCTCGCCGATCGCATC
CTCAAGCGCCTGGCCGGCGACACCGGCCTGCCGGCCGCCAGGCTGACCGGCGACGCACAGGAAAAGCTGAAGAACTACCG
CTTCCCGGGCAACGTCCGCGAGCTGGAAAACATGCTGGAGCGCGCCTACACCCTGTGCGAAGACGATCAGATCCAGCCTC
ACGACCTGCGCCTGGCCGATGCGCCGGGTGCCAGCCAGGAAGGCGCGGCGAGCCTGAGCGAAATCGACAACCTCGAGGAC
TACCTGGAAGACATCGAGCGCAAGCTGATCATGCAGGCGCTCGAGGAGACCCGCTGGAACCGCACCGCCGCGGCCCAGCG
CCTGGGCCTGACGTTCCGTTCGATGCGCTACCGCCTGAAAAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Response regulator receiver domain (Response_reg) (7-115)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	99.775	100	0.998
pilR	Acinetobacter baumannii strain A118	51.198	100	0.528
luxO	Vibrio cholerae strain A1552	38.17	100	0.384