Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | G3R43_RS26405 | Genome accession | NZ_LR739069 |
| Coordinates | 5608086..5608643 (+) | Length | 185 a.a. |
| NCBI ID | WP_003094697.1 | Uniprot ID | A0A6N0KGD7 |
| Organism | Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5603086..5613643
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3R43_RS26385 (PERCYII40_5263) | pilR | 5604362..5605699 (+) | 1338 | WP_003110427.1 | two-component system response regulator PilR | Regulator |
| G3R43_RS26390 (PERCYII40_5264) | thiO | 5605745..5606839 (-) | 1095 | WP_023096126.1 | glycine oxidase ThiO | - |
| G3R43_RS26395 (PERCYII40_5265) | - | 5606974..5607483 (+) | 510 | WP_009316266.1 | GspH/FimT family pseudopilin | - |
| G3R43_RS26400 (PERCYII40_5266) | - | 5607589..5608095 (+) | 507 | WP_003110423.1 | GspH/FimT family pseudopilin | - |
| G3R43_RS26405 (PERCYII40_5267) | pilV | 5608086..5608643 (+) | 558 | WP_003094697.1 | type 4a pilus minor pilin PilV | Machinery gene |
| G3R43_RS26410 (PERCYII40_5268) | pilW | 5608640..5609464 (+) | 825 | WP_023096127.1 | type 4a pilus minor pilin PilW | - |
| G3R43_RS26415 (PERCYII40_5269) | pilX | 5609461..5610048 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| G3R43_RS26420 (PERCYII40_5270) | pilY1 | 5610060..5613551 (+) | 3492 | WP_023096128.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20069.21 Da Isoelectric Point: 8.2164
>NTDB_id=1129695 G3R43_RS26405 WP_003094697.1 5608086..5608643(+) (pilV) [Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1129695 G3R43_RS26405 WP_003094697.1 5608086..5608643(+) (pilV) [Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAGTCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCAGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAGTCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCAGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
97.838 |
100 |
0.978 |