Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   NF38_RS02605 Genome accession   NZ_CP009610
Coordinates   532356..532859 (-) Length   167 a.a.
NCBI ID   WP_011272085.1    Uniprot ID   Q4QN52
Organism   Haemophilus influenzae strain Hi375     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 527356..537859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NF38_RS02575 (NF38_02575) - 527491..528543 (+) 1053 WP_005691316.1 extracellular solute-binding protein -
  NF38_RS02580 (NF38_02580) hslU 528613..529947 (-) 1335 WP_005666443.1 HslU--HslV peptidase ATPase subunit -
  NF38_RS02585 (NF38_02585) hslV 529958..530485 (-) 528 WP_011272086.1 ATP-dependent protease subunit HslV -
  NF38_RS02590 (NF38_02590) aphA 530705..531412 (+) 708 WP_038440558.1 acid phosphatase AphA -
  NF38_RS09320 - 531459..532254 (-) 796 Protein_496 IS3 family transposase -
  NF38_RS02605 (NF38_02605) luxS 532356..532859 (-) 504 WP_011272085.1 S-ribosylhomocysteine lyase Regulator
  NF38_RS02610 (NF38_02610) - 533044..533517 (-) 474 WP_011272084.1 YqaA family protein -
  NF38_RS02615 (NF38_02615) - 533517..534119 (-) 603 WP_005652027.1 beta-phosphoglucomutase family hydrolase -
  NF38_RS02620 (NF38_02620) - 534235..534612 (+) 378 WP_011272083.1 PRD domain-containing protein -
  NF38_RS02625 (NF38_02625) rsmG 534752..535363 (+) 612 WP_005652031.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  NF38_RS02630 (NF38_02630) - 535489..535863 (+) 375 WP_011272082.1 ATP synthase subunit I -
  NF38_RS02635 (NF38_02635) atpB 535900..536688 (+) 789 WP_005629251.1 F0F1 ATP synthase subunit A -
  NF38_RS02640 (NF38_02640) atpE 536744..536998 (+) 255 WP_005652035.1 F0F1 ATP synthase subunit C -
  NF38_RS02645 (NF38_02645) atpF 537048..537518 (+) 471 WP_005629246.1 F0F1 ATP synthase subunit B -

Sequence

Protein


Download         Length: 167 a.a.        Molecular weight: 18518.17 Da        Isoelectric Point: 4.8168

>NTDB_id=112968 NF38_RS02605 WP_011272085.1 532356..532859(-) (luxS) [Haemophilus influenzae strain Hi375]
MPLLDSFKVDHTKMNAPAVRIAKTMCTPKGDNITVFDLRFCIPNKEILSPKGIHTLEHLFAGFMRDHLNGDSIEIIDISP
MGCRTGFYMSLIGTPNEQEVSEAWLASMQDVLGVQDQASIPELNIYQCGSYTEHSLEDAHEIAKNVIARGIGVNKNEDLS
LDNSLLK

Nucleotide


Download         Length: 504 bp        

>NTDB_id=112968 NF38_RS02605 WP_011272085.1 532356..532859(-) (luxS) [Haemophilus influenzae strain Hi375]
ATGCCATTACTTGATAGTTTTAAAGTGGATCACACAAAAATGAACGCACCTGCAGTACGCATTGCAAAAACGATGTGCAC
GCCAAAAGGCGATAATATTACTGTTTTTGATTTACGTTTTTGTATTCCAAACAAAGAAATTCTTTCCCCAAAAGGCATTC
ATACACTTGAACATTTATTTGCTGGATTTATGCGCGATCATTTAAATGGCGATAGCATAGAAATTATTGATATTTCTCCG
ATGGGATGTCGCACGGGATTTTATATGTCTTTGATTGGCACACCAAATGAACAGGAAGTGTCTGAGGCTTGGTTAGCTTC
AATGCAAGATGTTTTAGGTGTACAAGATCAAGCTTCTATTCCCGAATTAAATATCTATCAATGCGGAAGCTATACGGAAC
ATTCCTTAGAAGATGCACACGAAATTGCCAAAAATGTTATCGCACGCGGTATAGGTGTAAATAAAAATGAAGATTTGTCA
CTCGATAATTCCTTATTAAAATAG

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QN52

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

74.096

99.401

0.737

Multiple sequence alignment