Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | FQT45_RS09125 | Genome accession | NZ_LR595858 |
| Coordinates | 1849466..1849957 (-) | Length | 163 a.a. |
| NCBI ID | WP_007892149.1 | Uniprot ID | A0A4U9Y9J5 |
| Organism | Streptococcus pseudoporcinus strain NCTC10228 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1844466..1854957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FQT45_RS09110 (NCTC10228_01881) | - | 1846809..1847753 (+) | 945 | WP_007892119.1 | magnesium transporter CorA family protein | - |
| FQT45_RS09115 (NCTC10228_01882) | - | 1847880..1848548 (+) | 669 | WP_077322518.1 | DUF1129 domain-containing protein | - |
| FQT45_RS09120 (NCTC10228_01883) | rpsR | 1849085..1849324 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| FQT45_RS09125 (NCTC10228_01884) | ssbA | 1849466..1849957 (-) | 492 | WP_007892149.1 | single-stranded DNA-binding protein | Machinery gene |
| FQT45_RS09130 (NCTC10228_01885) | rpsF | 1849981..1850271 (-) | 291 | WP_003084800.1 | 30S ribosomal protein S6 | - |
| FQT45_RS09135 (NCTC10228_01886) | mutY | 1850949..1852091 (+) | 1143 | WP_077322519.1 | A/G-specific adenine glycosylase | - |
| FQT45_RS09140 (NCTC10228_01887) | trxA | 1852198..1852512 (-) | 315 | WP_007892545.1 | thioredoxin | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18156.90 Da Isoelectric Point: 4.9119
>NTDB_id=1128501 FQT45_RS09125 WP_007892149.1 1849466..1849957(-) (ssbA) [Streptococcus pseudoporcinus strain NCTC10228]
MINNVVLVGRMTKDAELRYTPNQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSSNSYNSGGFNNTSTNNNYSASSQQTPNFGRDESPFGNSNPMEISDDD
LPF
MINNVVLVGRMTKDAELRYTPNQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSSNSYNSGGFNNTSTNNNYSASSQQTPNFGRDESPFGNSNPMEISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1128501 FQT45_RS09125 WP_007892149.1 1849466..1849957(-) (ssbA) [Streptococcus pseudoporcinus strain NCTC10228]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAAGATGCAGAGCTCCGTTATACACCAAACCAGGTAGCAGTTGC
TACTTTTACCCTTGCTGTAAATCGCACTTTTAAGAGCCAAAATGGGGAGCGTGAAGCGGATTTCATTAACTGTGTTATCT
GGCGCCAACCTGCTGAAAATTTAGCAAATTGGGCAAAAAAAGGTGCTTTAATCGGAATTACTGGTCGTATTCAGACTCGT
AATTATGAAAATCAACAGGGACAACGTGTTTACGTAACGGAAGTGGTTGCGGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGCTCATCTAATTCTTATAATAGTGGTGGTTTTAATAACACCTCAACTAATAATAATTATTCAGCTT
CTTCTCAACAAACACCTAACTTTGGTCGAGACGAAAGTCCATTTGGTAATTCAAACCCAATGGAAATTTCAGACGACGAT
CTACCATTCTAA
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAAGATGCAGAGCTCCGTTATACACCAAACCAGGTAGCAGTTGC
TACTTTTACCCTTGCTGTAAATCGCACTTTTAAGAGCCAAAATGGGGAGCGTGAAGCGGATTTCATTAACTGTGTTATCT
GGCGCCAACCTGCTGAAAATTTAGCAAATTGGGCAAAAAAAGGTGCTTTAATCGGAATTACTGGTCGTATTCAGACTCGT
AATTATGAAAATCAACAGGGACAACGTGTTTACGTAACGGAAGTGGTTGCGGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGCTCATCTAATTCTTATAATAGTGGTGGTTTTAATAACACCTCAACTAATAATAATTATTCAGCTT
CTTCTCAACAAACACCTAACTTTGGTCGAGACGAAAGTCCATTTGGTAATTCAAACCCAATGGAAATTTCAGACGACGAT
CTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.382 |
100 |
0.62 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.721 |
100 |
0.62 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |