Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   FQT45_RS03700 Genome accession   NZ_LR595858
Coordinates   743844..745202 (+) Length   452 a.a.
NCBI ID   WP_077323109.1    Uniprot ID   -
Organism   Streptococcus pseudoporcinus strain NCTC10228     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 738844..750202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT45_RS03675 (NCTC10228_00746) - 739887..740534 (-) 648 WP_077323106.1 amino acid ABC transporter permease -
  FQT45_RS03680 (NCTC10228_00747) - 740550..741254 (-) 705 WP_077323107.1 amino acid ABC transporter permease -
  FQT45_RS03685 (NCTC10228_00748) - 741272..742090 (-) 819 WP_077323108.1 transporter substrate-binding domain-containing protein -
  FQT45_RS03690 (NCTC10228_00749) - 742103..742882 (-) 780 WP_007893520.1 amino acid ABC transporter ATP-binding protein -
  FQT45_RS03695 (NCTC10228_00750) vicR 743141..743851 (+) 711 WP_007893534.1 response regulator YycF Regulator
  FQT45_RS03700 (NCTC10228_00751) vicK 743844..745202 (+) 1359 WP_077323109.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FQT45_RS03705 (NCTC10228_00752) vicX 745203..746015 (+) 813 WP_007893495.1 MBL fold metallo-hydrolase Regulator
  FQT45_RS03710 (NCTC10228_00753) rnc 746121..746813 (+) 693 WP_077323110.1 ribonuclease III -

Sequence


Protein


Download         Length: 452 a.a.        Molecular weight: 51734.23 Da        Isoelectric Point: 5.1818

>NTDB_id=1128480 FQT45_RS03700 WP_077323109.1 743844..745202(+) (vicK) [Streptococcus pseudoporcinus strain NCTC10228]
MTRDIVGNLSLFELAILFLLVFVAIYFIYLAVRDYRNAKIIRQMSHKIRDLINGRYTDDINSKADIELIDLSEQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRTGQIMMINETAQKQMNISREEALKKNITDLLGSESPYTYRELVSQTPI
VTLNRRDETGEFITLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTALAVEMTNFTAFMTSILNRFDLVRNQNTVAGKTYEIIRDYPIKS
IWLEIDNDKMTQVIENILNNAIKYSPDGGKIRVKMKTTESQLIISISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIVKQHKGFIWAKSDYGKGSTFTIVLPYDKDVMSDDVDEWEDDID

Nucleotide


Download         Length: 1359 bp        

>NTDB_id=1128480 FQT45_RS03700 WP_077323109.1 743844..745202(+) (vicK) [Streptococcus pseudoporcinus strain NCTC10228]
ATGACTAGAGACATCGTTGGAAATTTATCTTTATTTGAATTAGCAATACTCTTCTTATTGGTATTTGTTGCTATCTATTT
TATTTATTTAGCTGTTCGCGACTATCGTAATGCTAAAATTATCAGACAGATGAGTCACAAGATTCGTGATTTGATTAACG
GTCGTTATACTGATGATATTAATAGCAAAGCAGATATTGAACTAATTGACTTATCAGAACAACTTAATGATTTGTCAGAT
GTTTTTCGTCTCACTCATGAGAATTTAGCGCAGGAGAAGAATCGTCTGGCTAGTATTTTGGCTTATATGAGTGATGGTGT
TTTAGCGACTGACCGGACTGGTCAGATTATGATGATTAATGAAACAGCACAAAAACAGATGAACATCAGTCGTGAGGAAG
CTCTTAAAAAAAATATCACCGATCTCTTGGGGAGTGAATCCCCTTATACTTATAGAGAATTAGTGTCCCAAACACCAATT
GTTACCCTAAATCGTCGTGATGAGACAGGTGAATTTATCACACTTCGCTTACGCTTTGCTTTGAATCGACGTGAAAGTGG
CTTTATTTCAGGCTTGGTTGTTGTATTGCACGACACCACTGAACAAGAAAAAGAAGAAAGGGAGCGCCGTCTCTTCGTTT
CCAACGTTAGCCATGAGCTAAGAACCCCTTTGACTTCGGTTAAATCTTATCTAGAAGCGCTTGATGAAGGAGCTTTAAAA
GAAGATATTGCTCCAAGTTTTATCAAAGTGTCGCTTGATGAAACCAACCGTATGATGCGGATGATTTCTGATCTTTTGAA
TTTATCACGAATTGACAATCAAGTGACAGCCTTAGCTGTTGAGATGACTAACTTTACAGCTTTTATGACGTCAATCTTAA
ATCGTTTTGATTTGGTTCGTAATCAAAATACGGTTGCTGGCAAAACTTATGAAATCATTCGTGATTATCCCATAAAGTCA
ATTTGGTTAGAAATTGATAATGATAAGATGACCCAGGTTATTGAAAATATCCTAAATAATGCTATTAAATACTCTCCTGA
TGGTGGTAAAATCCGAGTTAAAATGAAGACTACGGAGAGTCAGCTAATTATTTCCATTTCCGACCAAGGTTTAGGGATTC
CTAAAAAAGATCTCCCTTTAATCTTCGACCGTTTTTATCGTGTTGATAAAGCACGCAGTCGGGCACAGGGTGGAACAGGG
CTGGGATTAGCTATTGCAAAAGAGATTGTTAAACAACATAAGGGCTTTATTTGGGCCAAAAGTGATTATGGTAAAGGTTC
GACCTTTACAATTGTTCTTCCTTATGACAAAGATGTAATGTCAGATGATGTTGATGAATGGGAGGACGATATTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.705

91.593

0.666

  micB Streptococcus pneumoniae Cp1015

66.588

94.027

0.626


Multiple sequence alignment