Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FQT45_RS03705 Genome accession   NZ_LR595858
Coordinates   745203..746015 (+) Length   270 a.a.
NCBI ID   WP_007893495.1    Uniprot ID   A0A4U9XIF8
Organism   Streptococcus pseudoporcinus strain NCTC10228     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 740203..751015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT45_RS03680 (NCTC10228_00747) - 740550..741254 (-) 705 WP_077323107.1 amino acid ABC transporter permease -
  FQT45_RS03685 (NCTC10228_00748) - 741272..742090 (-) 819 WP_077323108.1 transporter substrate-binding domain-containing protein -
  FQT45_RS03690 (NCTC10228_00749) - 742103..742882 (-) 780 WP_007893520.1 amino acid ABC transporter ATP-binding protein -
  FQT45_RS03695 (NCTC10228_00750) vicR 743141..743851 (+) 711 WP_007893534.1 response regulator YycF Regulator
  FQT45_RS03700 (NCTC10228_00751) vicK 743844..745202 (+) 1359 WP_077323109.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FQT45_RS03705 (NCTC10228_00752) vicX 745203..746015 (+) 813 WP_007893495.1 MBL fold metallo-hydrolase Regulator
  FQT45_RS03710 (NCTC10228_00753) rnc 746121..746813 (+) 693 WP_077323110.1 ribonuclease III -
  FQT45_RS03715 (NCTC10228_00754) smc 746814..750359 (+) 3546 WP_077323111.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30324.39 Da        Isoelectric Point: 5.5800

>NTDB_id=1128481 FQT45_RS03705 WP_007893495.1 745203..746015(+) (vicX) [Streptococcus pseudoporcinus strain NCTC10228]
MLEQEGFKYSILASGSTGNSFYLETPQKRILVDAGLTGKKIISLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARKYHL
DIYANQKTWQIIDDRNMIGKIDTTQKYIFDRDKVMTFGDLDIESFGVSHDAADPQFYRFMKDNKSFVMLTDTGYVSDRMS
GIISNADAYLIESNHDIEILRSGSYPWSLKQRILSDKGHLSNEDGAGAMIRSIGNKTKKIFLGHLSKENNIKELAHMTME
NQLAMADLAVGTDFKVYDTSPDTACSLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=1128481 FQT45_RS03705 WP_007893495.1 745203..746015(+) (vicX) [Streptococcus pseudoporcinus strain NCTC10228]
ATGCTAGAGCAAGAAGGATTTAAATATAGTATTTTAGCATCGGGGTCTACTGGTAACAGTTTCTATTTAGAAACGCCTCA
AAAACGTATCCTTGTTGATGCAGGATTGACTGGTAAAAAAATAATCAGTCTCTTAGCAGAAATAGATCGGAAGCCAGAAG
ATTTAGATGCCATATTAATTACACATGAACATTCTGATCATATAAAAGGAGTCGGTGTTCTTGCTCGTAAGTATCATCTT
GATATTTATGCTAATCAAAAAACGTGGCAGATTATTGATGATAGAAATATGATTGGAAAAATTGATACGACTCAAAAATA
TATTTTTGACCGTGATAAGGTCATGACCTTTGGGGATCTTGATATTGAAAGTTTTGGCGTCAGTCACGATGCGGCAGACC
CTCAATTTTATCGTTTTATGAAAGATAATAAATCATTCGTTATGTTAACAGATACTGGATATGTGAGTGATCGTATGTCT
GGCATTATTAGTAATGCAGATGCTTATTTGATTGAATCAAATCATGATATTGAGATCTTAAGATCAGGATCTTATCCATG
GAGTTTAAAACAACGGATTTTATCTGATAAGGGCCACTTGTCAAATGAAGATGGTGCTGGCGCGATGATTCGTAGCATTG
GCAATAAGACTAAGAAAATTTTCCTTGGACACCTGAGTAAGGAAAATAATATCAAAGAATTAGCTCACATGACAATGGAA
AACCAACTAGCGATGGCAGATTTAGCAGTAGGAACGGATTTTAAAGTATATGACACATCACCAGATACTGCTTGTTCCTT
AACAGATATTTAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(16-224)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U9XIF8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

99.63

0.763

Multiple sequence alignment