Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicR   Type   Regulator
Locus tag   FQT67_RS02930 Genome accession   NZ_LR595857
Coordinates   546994..547701 (+) Length   235 a.a.
NCBI ID   WP_046177366.1    Uniprot ID   A0A9X9R1S2
Organism   Streptococcus sp. NCTC 11567 strain NCTC11567     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 541994..552701
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT67_RS02905 (NCTC11567_00597) ftsY 542555..544105 (+) 1551 WP_046177369.1 signal recognition particle-docking protein FtsY -
  FQT67_RS02910 (NCTC11567_00598) - 544231..545046 (-) 816 WP_046177368.1 TIGR03943 family protein -
  FQT67_RS02915 (NCTC11567_00599) - 545046..545948 (-) 903 WP_012766694.1 permease -
  FQT67_RS10740 (NCTC11567_00600) - 546095..546250 (-) 156 WP_012766695.1 SPJ_0845 family protein -
  FQT67_RS02925 (NCTC11567_00601) - 546425..546907 (+) 483 WP_003055012.1 cupin domain-containing protein -
  FQT67_RS02930 (NCTC11567_00602) vicR 546994..547701 (+) 708 WP_046177366.1 response regulator transcription factor Regulator
  FQT67_RS02935 (NCTC11567_00603) - 547702..549030 (+) 1329 WP_046177365.1 ATP-binding protein -
  FQT67_RS02940 (NCTC11567_00604) - 549197..550072 (+) 876 WP_003055008.1 substrate-binding domain-containing protein -
  FQT67_RS02945 (NCTC11567_00606) pstC 550190..551053 (+) 864 WP_012766699.1 phosphate ABC transporter permease subunit PstC -
  FQT67_RS02950 (NCTC11567_00607) pstA 551046..551861 (+) 816 WP_003055017.1 phosphate ABC transporter permease PstA -
  FQT67_RS02955 (NCTC11567_00608) pstB 551863..552615 (+) 753 WP_003055005.1 phosphate ABC transporter ATP-binding protein PstB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 27404.66 Da        Isoelectric Point: 5.4397

>NTDB_id=1128424 FQT67_RS02930 WP_046177366.1 546994..547701(+) (vicR) [Streptococcus sp. NCTC 11567 strain NCTC11567]
MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLDGIEVCKRLRAKGIKTPIMMV
SAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRRTSKEQQEDDTDDFRDDYLVFGALTVYPDRHEVYKADHLLS
LTPKEFELLLYLMKHPNMTLTRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKAPQFIQTIRGYGYKFKEL

Nucleotide


Download         Length: 708 bp        

>NTDB_id=1128424 FQT67_RS02930 WP_046177366.1 546994..547701(+) (vicR) [Streptococcus sp. NCTC 11567 strain NCTC11567]
ATGACAAAACAAATCTTATTAGTGGATGATGAAGAACACATTTTGAGGCTACTGGATTATCATCTCGGTAAAGAAGGGTT
TTCCACACAATTGGTAACAGATGGCCGAAAAGCATTGACATTGGCAGAAACAGAGCCTTTTGACTTTATCCTACTGGATA
TTATGTTGCCTCAGTTAGACGGCATAGAAGTGTGTAAGCGACTGAGAGCTAAAGGAATAAAAACTCCGATTATGATGGTT
TCTGCTAAAAGTGATGAATTTGATAAGGTTTTGGCCTTGGAATTAGGAGCTGATGACTACCTGACTAAGCCTTTTAGCCC
TAGAGAATTGCTGGCGCGTGTCAAGGCTATTTTACGTCGAACCAGTAAAGAGCAGCAAGAAGATGACACAGATGATTTCA
GGGATGATTATCTGGTATTTGGGGCCCTGACCGTCTATCCAGACCGGCATGAGGTTTATAAGGCAGATCATTTATTGAGC
CTTACCCCAAAGGAATTTGAACTCTTGCTCTATCTTATGAAACATCCCAACATGACATTAACTAGGGAACGTTTACTTGA
ACGGATTTGGGGATATGATTTTGGACAAGAAACCCGTTTAGTGGATGTTCATATTGGCAAATTGAGAGATAAGATAGAGG
ATAATCCTAAAGCCCCTCAATTTATTCAAACGATTAGAGGCTATGGGTATAAGTTTAAGGAGTTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(159-232)

Response regulator receiver domain (Response_reg)

(5-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicR Streptococcus mutans UA159

49.145

99.574

0.489
  micA Streptococcus pneumoniae Cp1015

47.619

98.298

0.468
  covR Lactococcus lactis subsp. lactis strain DGCC12653

41.772

100

0.421
  covR Streptococcus salivarius strain HSISS4

40.506

100

0.409

Multiple sequence alignment