Detailed information NTG1128323

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: FJH52_RS04795
• Genome accession: NZ_LR595848
• Coordinates: 949210..950163 (+)
• Length: 317 a.a.
• NCBI ID: WP_139665155.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 4559 isolate 4559
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 944210..955163

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FJH52_RS04770	rpmG	944953..945102 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
FJH52_RS04775	secG	945142..945375 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
FJH52_RS04780	rnr	945477..947831 (+)	2355	WP_000654917.1	ribonuclease R	-
FJH52_RS04785	smpB	947794..948261 (+)	468	WP_001051747.1	SsrA-binding protein SmpB	-
FJH52_RS04790	tehB	948277..949137 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
FJH52_RS04795	coiA	949210..950163 (+)	954	WP_139665155.1	competence protein CoiA	Machinery gene
FJH52_RS04800	pepF	950182..951984 (+)	1803	WP_000244118.1	oligoendopeptidase F	Regulator
FJH52_RS04805	-	951986..952699 (+)	714	WP_000230399.1	O-methyltransferase	-
FJH52_RS04810	prsA	952766..953707 (+)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
FJH52_RS04815	-	953826..954167 (-)	342	Protein_974	transposase	-
FJH52_RS04820	-	954580..954675 (+)	96	Protein_975	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38242.92 Da
• Isoelectric Point: 9.2258

>NTDB_id=1128323 FJH52_RS04795 WP_139665155.1 949210..950163(+) (coiA) [Streptococcus pneumoniae strain 4559 isolate 4559]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKKTK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWIKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=1128323 FJH52_RS04795 WP_139665155.1 949210..950163(+) (coiA) [Streptococcus pneumoniae strain 4559 isolate 4559]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAAAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGATCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.054	100	0.991
coiA	Streptococcus pneumoniae Rx1	98.423	100	0.984
coiA	Streptococcus pneumoniae D39	98.423	100	0.984
coiA	Streptococcus pneumoniae R6	98.423	100	0.984
coiA	Streptococcus mitis NCTC 12261	88.328	100	0.883
coiA	Lactococcus lactis subsp. cremoris KW2	41.975	100	0.429