Detailed information NTG1128008

Bioinformatically predicted

Overview

• Name: lytF
• Type: Regulator
• Locus tag: FGL23_RS10375
• Genome accession: NZ_LR594049
• Coordinates: 2144719..2146368 (+)
• Length: 549 a.a.
• NCBI ID: WP_061603259.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain NCTC10231
• Function: cell lysis (predicted from homology) Cell lysis

Genomic Context

Location: 2139719..2151368

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL23_RS10345 (NCTC10231_02071)	-	2139863..2140090 (-)	228	WP_061603254.1	hypothetical protein	-
FGL23_RS10350 (NCTC10231_02072)	-	2140111..2140374 (-)	264	WP_081106355.1	hypothetical protein	-
FGL23_RS10355 (NCTC10231_02073)	purK	2140376..2141467 (-)	1092	WP_061603256.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
FGL23_RS10360 (NCTC10231_02074)	purE	2141454..2141942 (-)	489	WP_033605793.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
FGL23_RS10365 (NCTC10231_02075)	-	2141962..2143155 (-)	1194	WP_061603257.1	ATP-grasp domain-containing protein	-
FGL23_RS10370 (NCTC10231_02076)	purD	2143215..2144474 (-)	1260	WP_061603258.1	phosphoribosylamine--glycine ligase	-
FGL23_RS10375 (NCTC10231_02077)	lytF	2144719..2146368 (+)	1650	WP_061603259.1	GBS Bsp-like repeat-containing protein	Regulator
FGL23_RS10380 (NCTC10231_02078)	comB	2146487..2147845 (-)	1359	WP_061603260.1	competence pheromone export protein ComB	Regulator
FGL23_RS10385 (NCTC10231_02079)	comA	2147855..2150008 (-)	2154	WP_061603261.1	peptide cleavage/export ABC transporter ComA	Regulator
FGL23_RS10390 (NCTC10231_02080)	rpsD	2150468..2151079 (-)	612	WP_008810013.1	30S ribosomal protein S4	-

Sequence

Protein

• Length: 549 a.a.
• Molecular weight: 60395.27 Da
• Isoelectric Point: 9.2878

>NTDB_id=1128008 FGL23_RS10375 WP_061603259.1 2144719..2146368(+) (lytF) [Streptococcus gordonii strain NCTC10231]
MKKYKNFLLLSATLLTSLSAPLAAANEQFSPSQLTAMTSEVSVQLEGQTAIVQYQPTAAQEAYPIQHAVWSEEGGQDDIV
WYSADQSTTRIDLSQHKGQGKFLIETYLNVNGIKYHLSSKSVFLNKPVQPAEKTVPEQQDSTSSNNATPQAPAEPKPTNP
APTPAPAPATNRVENPRNSYPKVEERNKSLPPQKVADPKAAPPQAKPNNNKPLQASAARVPAEPVRDSKPLISITNINKE
NGTYTVRVQENPYSKKIKSVQVPIWSTANQSNLKWYEASKIGNGSFSVQFDIRNHQQIYGNYINHVYITYEDGSRVGYVA
ENVNLPQPAPQPLTPSLQVVHKGQSNYQVILQNSFGDGHILFPIWSDINGQDDLRWYTANSLGNGRYSLDFNANNHIGDG
LYHVHVYRQSGGKVTGVMASNFQVTRPTVAVRKPLNHTSDPSNTYPIGECTWGAKALAPWAGNWWGNGGDWAASARRAGF
RVGSTPQVGAIACWTDGGYGHVGVVTHVDSHKRIQIQESNYAGQRYIANFRGWFDPTIAQGTVSYIYPN

Nucleotide

• Length: 1650 bp

>NTDB_id=1128008 FGL23_RS10375 WP_061603259.1 2144719..2146368(+) (lytF) [Streptococcus gordonii strain NCTC10231]
ATGAAAAAATACAAAAATTTCTTACTGCTTTCAGCAACCTTGTTGACCTCACTATCTGCTCCCTTAGCTGCAGCGAATGA
GCAGTTTAGCCCATCCCAACTGACGGCTATGACCAGCGAAGTTTCCGTTCAGCTTGAAGGACAAACGGCGATTGTTCAGT
ACCAGCCGACCGCTGCGCAAGAAGCTTATCCCATCCAACATGCCGTCTGGTCTGAGGAGGGTGGCCAAGACGATATTGTC
TGGTATTCAGCTGATCAAAGCACGACCAGGATTGACTTGTCTCAGCACAAGGGCCAGGGCAAATTTCTCATCGAGACTTA
TCTCAATGTGAATGGTATCAAATATCACTTGAGTAGTAAATCGGTCTTTCTAAACAAGCCGGTTCAACCAGCCGAAAAAA
CTGTCCCTGAACAGCAAGACAGCACTTCGTCTAACAATGCCACACCTCAAGCACCGGCTGAGCCAAAACCAACTAACCCA
GCACCTACTCCAGCTCCGGCTCCCGCGACCAATAGAGTTGAAAATCCTCGGAACTCCTATCCAAAAGTCGAAGAGCGAAA
CAAATCTCTTCCTCCTCAAAAGGTAGCTGACCCAAAGGCGGCGCCCCCTCAGGCAAAGCCAAACAACAACAAACCTCTGC
AAGCTTCAGCTGCTAGAGTACCGGCAGAGCCTGTCAGAGACAGCAAGCCACTCATCAGTATTACCAACATTAATAAGGAA
AATGGAACCTATACCGTAAGGGTCCAAGAAAACCCTTATTCCAAGAAAATTAAAAGTGTGCAGGTGCCTATTTGGAGCAC
CGCAAATCAAAGCAATCTTAAATGGTATGAGGCTTCAAAGATAGGTAACGGAAGCTTTTCTGTTCAATTCGACATCCGAA
ATCACCAGCAGATTTACGGCAACTATATCAATCACGTCTACATTACCTATGAAGACGGTAGCCGAGTTGGCTATGTTGCT
GAAAATGTCAATCTGCCTCAGCCAGCACCCCAACCACTAACTCCGAGTCTGCAAGTGGTCCATAAAGGTCAATCAAACTA
TCAAGTTATCTTACAAAATAGTTTCGGTGACGGCCATATCCTCTTCCCCATCTGGTCAGATATTAATGGCCAAGACGACC
TCCGCTGGTATACGGCTAATTCTCTTGGTAATGGGCGCTATTCGTTAGATTTCAACGCCAACAATCATATCGGTGATGGT
CTATATCATGTCCATGTCTATCGACAATCTGGTGGGAAAGTAACTGGGGTCATGGCCTCTAATTTTCAAGTGACACGCCC
AACAGTAGCTGTGAGAAAACCTCTTAACCATACAAGCGACCCAAGTAACACCTACCCTATTGGTGAATGTACATGGGGTG
CCAAGGCTCTCGCTCCTTGGGCAGGAAACTGGTGGGGAAATGGTGGGGACTGGGCAGCCAGTGCTCGCCGAGCAGGATTC
CGTGTAGGATCCACACCTCAGGTCGGAGCCATTGCCTGCTGGACTGACGGTGGATACGGACATGTCGGCGTCGTCACGCA
TGTTGATTCACATAAGCGTATCCAAATTCAGGAATCCAACTACGCTGGACAGCGCTATATCGCTAATTTCCGTGGCTGGT
TTGACCCAACCATCGCTCAGGGCACGGTTTCCTATATCTACCCAAATTAA

Domains

Predicted by InterproScan.

• CHAP domain (CHAP) (443-520)

• GBS Bsp-like repeat (GBS_Bsp-like) (344-414)

• GBS Bsp-like repeat (GBS_Bsp-like) (57-112)

• GBS Bsp-like repeat (GBS_Bsp-like) (234-319)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
lytF	Streptococcus gordonii str. Challis substr. CH1	97.814	100	0.978
lytF	Streptococcus gordonii strain NCTC7865	95.446	100	0.954