Detailed information    

insolico Bioinformatically predicted

Overview


Name   cclA/cilC   Type   Machinery gene
Locus tag   FGL12_RS03280 Genome accession   NZ_LR594041
Coordinates   692845..693507 (-) Length   220 a.a.
NCBI ID   WP_012000141.1    Uniprot ID   A8AW07
Organism   Streptococcus gordonii strain NCTC9124     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 687845..698507
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL12_RS03250 (NCTC9124_00652) - 687975..688538 (+) 564 WP_012000135.1 aminodeoxychorismate/anthranilate synthase component II -
  FGL12_RS03255 (NCTC9124_00653) trpD 688549..689553 (+) 1005 WP_012000136.1 anthranilate phosphoribosyltransferase -
  FGL12_RS03260 (NCTC9124_00654) trpC 689550..690317 (+) 768 WP_012000137.1 indole-3-glycerol phosphate synthase TrpC -
  FGL12_RS03265 (NCTC9124_00655) - 690304..690891 (+) 588 WP_012000138.1 phosphoribosylanthranilate isomerase -
  FGL12_RS03270 (NCTC9124_00656) trpB 690881..692104 (+) 1224 WP_012000139.1 tryptophan synthase subunit beta -
  FGL12_RS03275 (NCTC9124_00657) trpA 692097..692876 (+) 780 WP_012000140.1 tryptophan synthase subunit alpha -
  FGL12_RS03280 (NCTC9124_00658) cclA/cilC 692845..693507 (-) 663 WP_012000141.1 A24 family peptidase Machinery gene
  FGL12_RS03290 (NCTC9124_00659) - 693676..694191 (+) 516 WP_008809115.1 Dps family protein -
  FGL12_RS03295 (NCTC9124_00660) - 694333..694593 (+) 261 WP_012000142.1 YqgQ family protein -
  FGL12_RS03300 (NCTC9124_00661) - 694590..694967 (+) 378 WP_020992684.1 rhodanese-like domain-containing protein -
  FGL12_RS03305 (NCTC9124_00662) - 695133..695858 (-) 726 WP_138101153.1 pseudouridine synthase -
  FGL12_RS03310 (NCTC9124_00663) typA 696040..697887 (+) 1848 WP_012000144.1 translational GTPase TypA -
  FGL12_RS03315 (NCTC9124_00664) - 697911..698189 (+) 279 WP_012000145.1 DUF3165 family protein -

Sequence


Protein


Download         Length: 220 a.a.        Molecular weight: 24731.17 Da        Isoelectric Point: 8.6451

>NTDB_id=1127484 FGL12_RS03280 WP_012000141.1 692845..693507(-) (cclA/cilC) [Streptococcus gordonii strain NCTC9124]
MIHLYFFLVGTVFASFLGLVIDRFPEQSIITPASHCNACGKRLAPRDLIPIVSQVLNRLRCRFCGDKIPLRYLFFECIFG
CLFLATSLGTISISQLLLLTMGITLAIYDQRELQYPLMIWLVFQLLLLMISGINLLILFFLALGLLAFFYNLRIGAGDFL
FLASCSAIFSLTEILILIQIASFSGLACFCFKKKKDRLAFVPCLLFGVVVIISYKLLLLG

Nucleotide


Download         Length: 663 bp        

>NTDB_id=1127484 FGL12_RS03280 WP_012000141.1 692845..693507(-) (cclA/cilC) [Streptococcus gordonii strain NCTC9124]
ATGATTCACCTATACTTTTTTCTTGTTGGTACCGTCTTTGCCTCATTCCTAGGCTTGGTCATCGACCGCTTCCCAGAGCA
GTCTATCATCACACCAGCTAGTCATTGTAATGCCTGTGGGAAAAGACTGGCCCCTCGTGACTTGATTCCTATTGTTTCCC
AAGTCTTGAACCGTCTTCGCTGTCGCTTCTGTGGAGACAAGATTCCCTTACGTTATTTATTTTTTGAATGTATCTTTGGC
TGTCTTTTTCTGGCCACTTCACTTGGTACAATTTCTATCAGTCAACTCCTGCTACTTACCATGGGCATAACGTTGGCCAT
ATATGATCAAAGAGAGCTGCAATACCCCTTAATGATCTGGTTAGTTTTTCAGCTCTTGTTGCTAATGATATCGGGCATCA
ATCTTCTCATACTCTTCTTTTTAGCCCTAGGACTTCTAGCCTTCTTTTATAATCTTCGTATTGGAGCTGGTGACTTTCTT
TTTCTTGCTTCCTGCTCAGCCATTTTTAGTCTGACGGAAATTCTCATTCTTATCCAAATCGCTAGCTTCTCTGGCCTCGC
CTGTTTCTGCTTTAAAAAGAAAAAAGACAGGCTGGCATTTGTACCCTGTCTTTTGTTTGGTGTGGTGGTGATTATTTCTT
ATAAGCTGCTGCTTCTTGGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A8AW07

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis NCTC 12261

59.361

99.545

0.591

  cclA/cilC Streptococcus mitis SK321

58.904

99.545

0.586

  cclA/cilC Streptococcus pneumoniae Rx1

57.991

99.545

0.577

  cclA/cilC Streptococcus pneumoniae D39

57.991

99.545

0.577

  cclA/cilC Streptococcus pneumoniae R6

57.991

99.545

0.577

  cclA/cilC Streptococcus pneumoniae TIGR4

57.534

99.545

0.573


Multiple sequence alignment