Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   FGK97_RS07170 Genome accession   NZ_LR594037
Coordinates   1439634..1441610 (-) Length   658 a.a.
NCBI ID   WP_138099478.1    Uniprot ID   -
Organism   Streptococcus anginosus strain NCTC11064     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1434634..1446610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK97_RS07155 (NCTC11064_01474) amiD 1434658..1435584 (-) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator
  FGK97_RS07160 (NCTC11064_01475) amiC 1435584..1437080 (-) 1497 WP_003026183.1 ABC transporter permease Regulator
  FGK97_RS07165 (NCTC11064_01476) amiA3 1437457..1439436 (-) 1980 WP_021002029.1 peptide ABC transporter substrate-binding protein Regulator
  FGK97_RS07170 (NCTC11064_01477) amiA3 1439634..1441610 (-) 1977 WP_138099478.1 peptide ABC transporter substrate-binding protein Regulator
  FGK97_RS07175 (NCTC11064_01478) - 1441776..1442459 (-) 684 WP_106079118.1 B3/4 domain-containing protein -
  FGK97_RS07180 (NCTC11064_01479) - 1442693..1444303 (-) 1611 WP_021002032.1 CTP synthase -
  FGK97_RS07185 (NCTC11064_01480) rpoE 1444487..1445074 (-) 588 WP_003026189.1 DNA-directed RNA polymerase subunit delta -
  FGK97_RS07190 (NCTC11064_01481) tig 1445312..1446595 (-) 1284 WP_003026190.1 trigger factor -

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72364.84 Da        Isoelectric Point: 7.8834

>NTDB_id=1127440 FGK97_RS07170 WP_138099478.1 1439634..1441610(-) (amiA3) [Streptococcus anginosus strain NCTC11064]
MKKSKIIAVVGLALLTSGLLAACSGSKSNSAETKFGYVYSSDPETLDYVTSGKATTSDLVTNGVDGLLENDKYGNLVPSM
AKSWTVSKDGLTYTYKLRKGAKWYTSEGEEYAEVKAQDFVTGLKHAADKKSEALYLVQNSIKGLDAYVNGQTKDFSTVGV
KAVDDYTVQYTLNKPEPYWNSKTTSAIMWPINAEFLKSKGNKFGQSTDPNSILYNGPFLMKAITAKSAVEYVKNKHYWDK
DKVKVDSIKLAYYDGQDQDSLARNFKDGAYSYARLFPTSSNFATFEKQFKDNIYTAEAGSGTAALALNIDRQSYNHTAKK
TDEEKNSTKKALLNKDFRQALNFALDRESYAAQVNGKDGAATAIRNMFVPSNFVQVGEKSFSDVVEEKLASYGDDWKGVK
LADSQNGLYNPTKAKEKFAKAKAALQAQGVQFPIHLDVPTVETSKSYVARMQSLKQSVEKVLGKENVVMDLNMMSEDDFN
NVTYYAPNAAGEDWDISGAVGWNPDYQDPSTYLDILKSTASDNTKTWFGFDSGSENAGAKAVGLDEYNKLVDEAGAETTD
IAKRYEKYAAAQAWLTDSSLVLPTMASTGAGTFVSRIQPFSGAFAQTGSKGSSTYFKYIKVGNDTVTKKDYEAAKKKWQK
EKAESNKKAQDELADHVK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=1127440 FGK97_RS07170 WP_138099478.1 1439634..1441610(-) (amiA3) [Streptococcus anginosus strain NCTC11064]
ATGAAAAAAAGTAAAATCATCGCAGTTGTGGGGCTAGCTCTTTTAACGTCTGGTCTTTTAGCTGCTTGCTCGGGTTCGAA
ATCGAACTCAGCTGAAACAAAATTTGGTTATGTGTATTCTAGTGATCCAGAAACTTTGGATTATGTAACATCAGGAAAAG
CAACCACTAGCGATCTTGTGACAAATGGAGTTGACGGATTGTTAGAAAATGACAAATATGGAAATCTTGTACCATCAATG
GCTAAGTCATGGACTGTATCAAAAGATGGTTTAACCTATACTTATAAACTTCGTAAGGGTGCCAAATGGTACACATCAGA
AGGGGAAGAATACGCAGAAGTTAAAGCGCAAGACTTTGTAACTGGTTTGAAACATGCTGCCGATAAAAAATCTGAGGCGC
TTTATTTGGTTCAAAACTCAATTAAAGGTTTAGATGCTTACGTGAATGGTCAAACAAAAGACTTTTCAACGGTAGGTGTG
AAAGCAGTTGATGATTATACTGTTCAGTATACATTGAACAAGCCAGAACCATATTGGAATTCTAAGACAACCTCTGCCAT
TATGTGGCCAATCAATGCAGAATTTTTGAAATCTAAAGGAAATAAATTTGGCCAATCAACAGACCCTAACTCAATCCTTT
ATAATGGACCATTCTTGATGAAAGCTATCACAGCAAAATCTGCGGTAGAATATGTTAAAAACAAACATTATTGGGATAAA
GATAAAGTAAAAGTTGATAGCATTAAACTTGCTTACTATGATGGTCAAGACCAGGACTCATTGGCTCGTAATTTCAAAGA
TGGGGCATACTCATACGCACGCCTCTTCCCAACAAGTTCAAACTTTGCAACTTTTGAAAAACAATTCAAGGACAATATCT
ATACAGCAGAAGCAGGCTCTGGAACGGCTGCTTTAGCCCTTAATATTGACCGTCAATCTTACAACCACACGGCTAAGAAA
ACAGATGAAGAAAAAAATTCAACGAAAAAGGCATTGTTGAACAAAGACTTCCGTCAAGCTTTGAACTTTGCACTTGACCG
CGAATCTTATGCAGCACAAGTAAATGGTAAAGATGGTGCTGCCACAGCAATCCGTAATATGTTTGTACCATCTAATTTTG
TTCAAGTTGGTGAAAAATCATTTAGTGATGTTGTAGAAGAAAAATTAGCAAGCTATGGCGATGACTGGAAGGGTGTCAAA
CTAGCTGATTCACAAAACGGCTTGTACAATCCAACAAAAGCAAAAGAAAAATTTGCAAAAGCAAAAGCAGCTTTGCAAGC
TCAAGGTGTACAGTTCCCAATCCACTTAGATGTTCCTACTGTAGAAACTTCTAAGAGCTACGTTGCTCGGATGCAGTCTT
TAAAACAATCTGTTGAAAAAGTACTTGGTAAAGAAAATGTTGTCATGGACTTGAACATGATGTCAGAAGATGACTTTAAC
AACGTCACTTACTATGCTCCAAATGCAGCTGGAGAAGACTGGGATATCTCAGGCGCTGTTGGTTGGAATCCCGACTATCA
AGATCCATCTACTTATCTTGACATTTTGAAATCAACAGCTTCTGATAATACGAAGACATGGTTTGGATTTGACTCTGGTA
GTGAAAATGCTGGTGCTAAAGCAGTCGGCTTGGACGAATATAATAAATTAGTCGATGAAGCAGGTGCAGAAACAACAGAC
ATTGCAAAACGTTATGAAAAATATGCAGCAGCACAAGCTTGGTTAACAGACAGTTCACTTGTCTTACCAACAATGGCTTC
AACAGGTGCCGGAACTTTTGTGTCACGCATTCAACCGTTCTCAGGTGCATTTGCGCAAACAGGTAGTAAAGGTAGCTCAA
CCTACTTCAAATACATTAAAGTCGGTAACGATACTGTCACTAAGAAAGACTATGAAGCAGCTAAGAAGAAATGGCAAAAA
GAAAAAGCCGAGTCTAATAAAAAAGCTCAAGATGAATTAGCTGATCATGTAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

64.036

100

0.641
  amiA3 Streptococcus thermophilus LMG 18311

63.885

100

0.64
  amiA Streptococcus salivarius strain HSISS4

62.918

100

0.629

Multiple sequence alignment