Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiC   Type   Regulator
Locus tag   FGK97_RS07160 Genome accession   NZ_LR594037
Coordinates   1435584..1437080 (-) Length   498 a.a.
NCBI ID   WP_003026183.1    Uniprot ID   A0AAP6BP12
Organism   Streptococcus anginosus strain NCTC11064     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1430584..1442080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK97_RS07135 (NCTC11064_01470) - 1430642..1431607 (+) 966 WP_003026172.1 LacI family DNA-binding transcriptional regulator -
  FGK97_RS07140 (NCTC11064_01471) - 1431681..1432505 (-) 825 WP_021002027.1 Cof-type HAD-IIB family hydrolase -
  FGK97_RS07145 (NCTC11064_01472) amiF 1432648..1433571 (-) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  FGK97_RS07150 (NCTC11064_01473) amiE 1433582..1434649 (-) 1068 WP_021002028.1 ABC transporter ATP-binding protein Regulator
  FGK97_RS07155 (NCTC11064_01474) amiD 1434658..1435584 (-) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator
  FGK97_RS07160 (NCTC11064_01475) amiC 1435584..1437080 (-) 1497 WP_003026183.1 ABC transporter permease Regulator
  FGK97_RS07165 (NCTC11064_01476) amiA3 1437457..1439436 (-) 1980 WP_021002029.1 peptide ABC transporter substrate-binding protein Regulator
  FGK97_RS07170 (NCTC11064_01477) amiA3 1439634..1441610 (-) 1977 WP_138099478.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 498 a.a.        Molecular weight: 55875.99 Da        Isoelectric Point: 10.0807

>NTDB_id=1127438 FGK97_RS07160 WP_003026183.1 1435584..1437080(-) (amiC) [Streptococcus anginosus strain NCTC11064]
MKKYIFMRILRSLVSIFMVTTLTYTIIYTMVPRKLIFKQDPNYNKIATTPDKKANYENTIFERMGYIDYYDTKELQEKAS
KENSSVTVEPTNANKKIYEAYIKKLGRGWKLQQFKESKQFYATREVPVYERVLGFYGNLIQIDHTGAVKDASNPNLKRYI
RIENDPAIGWSVVGSGTRHKYLLYFNSQFPFIHQNFVRLNLGTSYPTYANLPVLQVISQGQGQTKTSEVQFPTGKKTSSV
NIYTRTYKSPKQADARDVANYGKDDPYTATESNYQYPSMIVSSSIVGLIGLALSYLIAVPLGSYMARFKNTLFDSISTGA
LTFLMSLPTIALVYIIRLIGSAIGLPDSFPILGAGDWRSYVLPAVILGLLSAPWTAVWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSSIPNSVIGVITGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCLSIFALLLGD
ILMTVLDPRIKLTSKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=1127438 FGK97_RS07160 WP_003026183.1 1435584..1437080(-) (amiC) [Streptococcus anginosus strain NCTC11064]
ATGAAGAAATATATTTTTATGCGTATCTTACGCTCTTTAGTATCTATTTTCATGGTAACAACGCTGACTTACACCATTAT
CTATACCATGGTGCCTAGGAAGTTGATTTTCAAACAGGACCCAAACTATAACAAAATAGCGACAACTCCTGATAAAAAAG
CCAATTACGAAAATACGATTTTTGAGCGTATGGGTTACATTGACTACTATGATACGAAGGAATTACAAGAAAAAGCTAGT
AAAGAGAATTCCTCTGTAACAGTAGAACCTACTAATGCAAATAAAAAAATCTATGAAGCTTACATCAAAAAGCTGGGACG
CGGTTGGAAATTGCAGCAATTTAAAGAAAGCAAGCAATTTTATGCAACTCGTGAAGTTCCAGTCTATGAACGCGTTCTTG
GTTTCTATGGTAATTTGATTCAAATTGACCATACAGGTGCTGTGAAAGATGCTTCTAATCCGAATTTGAAGCGTTATATT
CGCATTGAAAATGATCCTGCTATTGGTTGGTCTGTTGTTGGTTCTGGAACAAGACATAAATATTTATTATATTTCAATAG
TCAGTTTCCATTTATTCACCAAAATTTTGTAAGATTAAATCTAGGAACTTCTTATCCGACCTATGCTAATCTTCCTGTTT
TACAGGTTATTTCACAAGGGCAAGGTCAAACGAAGACATCAGAAGTTCAATTTCCAACAGGAAAGAAAACATCATCTGTT
AATATTTATACGCGTACATATAAGTCTCCAAAACAAGCCGATGCACGCGATGTTGCTAATTACGGAAAAGATGATCCTTA
TACGGCGACAGAGAGCAATTATCAATATCCATCTATGATTGTGAGTTCTTCTATTGTTGGGTTAATTGGTTTGGCCTTGT
CATACTTAATCGCCGTTCCACTTGGATCTTATATGGCTCGCTTTAAGAATACATTGTTTGATAGTATTTCAACCGGTGCT
TTGACTTTCTTAATGTCACTGCCAACTATTGCCTTGGTTTATATCATTCGCTTGATTGGTTCAGCGATTGGCTTGCCTGA
TTCATTCCCTATTTTGGGAGCAGGTGATTGGCGCTCTTATGTGTTGCCGGCAGTCATTCTTGGACTCTTGAGTGCGCCTT
GGACAGCCGTTTGGATTCGCCGTTATATGATTGACTTGCAATCACAAGATTTTGTTCGTTTTGCACGTGCAAAAGGTCTT
TCTGAAAAAGAAATTTCTAATAAACATATTTTCAAAAATGCCATGGTGCCACTTGTATCCAGCATTCCAAACTCAGTTAT
TGGGGTTATTACAGGTGCAACTTTGACTGAAACAGTCTTCGCTTTCCCTGGTATGGGTAAGATGTTGATTGACTCTGTTA
AAGCTTCAAACAATTCTATGGTCGTTGGTCTTGTCTTTATCTTTACTTGTCTTTCTATCTTCGCTCTTTTATTGGGTGAT
ATTCTGATGACAGTGCTTGACCCACGTATTAAATTAACATCAAAAGGAGGTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

80.321

100

0.803

  amiC Streptococcus thermophilus LMG 18311

79.92

100

0.799

  amiC Streptococcus thermophilus LMD-9

79.719

100

0.797


Multiple sequence alignment