Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   FGK97_RS02045 Genome accession   NZ_LR594037
Coordinates   398554..399213 (-) Length   219 a.a.
NCBI ID   WP_049516828.1    Uniprot ID   A0AAP6BQ13
Organism   Streptococcus anginosus strain NCTC11064     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 393554..404213
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK97_RS02025 (NCTC11064_00408) - 394598..395164 (+) 567 WP_021001376.1 YutD family protein -
  FGK97_RS02030 (NCTC11064_00409) rlmN 395198..396280 (+) 1083 WP_021001377.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  FGK97_RS02035 (NCTC11064_00410) - 396273..396803 (+) 531 WP_003025737.1 VanZ family protein -
  FGK97_RS02040 (NCTC11064_00412) trpB 397188..398384 (+) 1197 WP_138099356.1 tryptophan synthase subunit beta -
  FGK97_RS02045 (NCTC11064_00413) cclA/cilC 398554..399213 (-) 660 WP_049516828.1 prepilin peptidase Machinery gene
  FGK97_RS02050 (NCTC11064_00414) - 399367..399894 (+) 528 WP_049516827.1 Dps family protein -
  FGK97_RS02055 (NCTC11064_00415) - 400168..400392 (+) 225 WP_003025724.1 YqgQ family protein -
  FGK97_RS02060 (NCTC11064_00416) - 400386..400766 (+) 381 WP_024052074.1 rhodanese-like domain-containing protein -
  FGK97_RS02065 (NCTC11064_00417) - 400787..401512 (-) 726 WP_003025719.1 16S rRNA pseudouridine(516) synthase -
  FGK97_RS02070 (NCTC11064_00418) typA 401690..403531 (+) 1842 WP_057489582.1 translational GTPase TypA -
  FGK97_RS02075 (NCTC11064_00419) - 403596..403880 (+) 285 WP_003025714.1 DUF3165 family protein -

Sequence

Protein


Download         Length: 219 a.a.        Molecular weight: 24779.26 Da        Isoelectric Point: 8.2306

>NTDB_id=1127407 FGK97_RS02045 WP_049516828.1 398554..399213(-) (cclA/cilC) [Streptococcus anginosus strain NCTC11064]
MIHFYFFLVGSIVASFLGLVVDRFPEQSIIVPSSHCNACGQKLAPRDLVPVLSQLINRLRCRFCQSKIPIRYLILELVGS
LLFLATSLSYLTISQLVLLIMGITLALYDQREQEYPILIWLFFHLLLLFLVGFNLLMTIFLALGILAHFVDLRIGAGDFL
FLASCSTVFKLTEILWLIQIASLVGLCLFCLKKRKDRIAFVPCLLIGVIVLLLCELLLQ

Nucleotide


Download         Length: 660 bp        

>NTDB_id=1127407 FGK97_RS02045 WP_049516828.1 398554..399213(-) (cclA/cilC) [Streptococcus anginosus strain NCTC11064]
ATGATTCATTTTTATTTTTTCTTGGTTGGAAGCATTGTGGCTTCTTTTTTAGGGCTGGTTGTTGATCGCTTTCCTGAACA
GTCCATTATCGTTCCTTCCAGTCATTGTAATGCTTGTGGGCAGAAATTAGCACCTCGTGATTTAGTCCCTGTCCTTTCAC
AGCTTATCAATCGACTGCGCTGTCGGTTTTGTCAGTCAAAAATTCCCATTCGCTACTTGATATTAGAGTTGGTAGGTAGT
TTACTCTTTCTCGCAACTTCCTTAAGCTACTTAACTATCAGCCAACTTGTCTTGCTCATAATGGGAATTACACTAGCTCT
TTATGATCAAAGAGAACAGGAATATCCTATCCTCATTTGGTTGTTCTTTCATCTTCTTCTCCTATTTTTGGTAGGTTTTA
ATCTTCTAATGACTATTTTTTTAGCTCTTGGAATTTTGGCTCATTTCGTTGATTTGCGTATCGGTGCAGGAGATTTTCTT
TTTCTAGCTTCTTGTTCAACTGTTTTCAAGTTGACAGAGATTCTTTGGCTGATTCAAATTGCCAGCTTAGTGGGCTTATG
TCTCTTTTGCTTAAAAAAGAGAAAAGACAGGATAGCTTTCGTTCCCTGTCTTTTGATTGGAGTGATTGTTCTGCTTTTAT
GCGAACTGTTGCTTCAATAA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

57.339

99.543

0.571
  cclA/cilC Streptococcus mitis NCTC 12261

56.881

99.543

0.566
  cclA/cilC Streptococcus pneumoniae Rx1

56.881

99.543

0.566
  cclA/cilC Streptococcus pneumoniae D39

56.881

99.543

0.566
  cclA/cilC Streptococcus pneumoniae R6

56.881

99.543

0.566
  cclA/cilC Streptococcus pneumoniae TIGR4

55.963

99.543

0.557

Multiple sequence alignment