Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   FGK96_RS06750 Genome accession   NZ_LR594036
Coordinates   1413401..1414759 (-) Length   452 a.a.
NCBI ID   WP_138082495.1    Uniprot ID   A0A4U9Z9V9
Organism   Streptococcus porcinus strain NCTC10710     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1408401..1419759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK96_RS06740 (NCTC10710_01398) rnc 1411792..1412484 (-) 693 WP_003085736.1 ribonuclease III -
  FGK96_RS06745 (NCTC10710_01399) vicX 1412588..1413400 (-) 813 WP_138082493.1 MBL fold metallo-hydrolase Regulator
  FGK96_RS06750 (NCTC10710_01400) vicK 1413401..1414759 (-) 1359 WP_138082495.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGK96_RS06755 (NCTC10710_01401) vicR 1414752..1415462 (-) 711 WP_003084933.1 response regulator YycF Regulator
  FGK96_RS06760 (NCTC10710_01402) - 1415723..1416502 (+) 780 WP_138082497.1 amino acid ABC transporter ATP-binding protein -
  FGK96_RS06765 (NCTC10710_01403) - 1416515..1417333 (+) 819 WP_138082499.1 transporter substrate-binding domain-containing protein -
  FGK96_RS06770 (NCTC10710_01404) - 1417351..1418055 (+) 705 WP_138082501.1 amino acid ABC transporter permease -
  FGK96_RS06775 (NCTC10710_01405) - 1418071..1418718 (+) 648 WP_138082503.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 452 a.a.        Molecular weight: 51693.13 Da        Isoelectric Point: 5.0837

>NTDB_id=1127352 FGK96_RS06750 WP_138082495.1 1413401..1414759(-) (vicK) [Streptococcus porcinus strain NCTC10710]
MTRDIVGNLSLFELAILFLLVFVAIYFIYLAVRDYRNAKIIRQMSHKIRDLINGRYTDDINSKADIELIDLSEQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRTGQIMMINETAQKQMNISREEALTKNITDLLGSESPYTYRELVSQTPI
VTINRRDETGEFITLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTALAVEMTNFTAFMTSILNRFDLVRNQNTVAGKTYEIIRDYPIKS
IWLEIDNDKMTQVIENILNNAIKYSPDGGKIRVKMKTTDSQLIISISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIVKQHKGFIWAKSDYGKGSTFTIVLPYDKDVMSDDVDEWEDDID

Nucleotide


Download         Length: 1359 bp        

>NTDB_id=1127352 FGK96_RS06750 WP_138082495.1 1413401..1414759(-) (vicK) [Streptococcus porcinus strain NCTC10710]
ATGACTAGAGACATCGTTGGAAATTTATCTTTATTTGAATTAGCAATACTCTTCTTATTGGTTTTTGTTGCTATCTATTT
TATTTATTTAGCTGTTCGCGATTATCGTAATGCTAAAATTATCAGACAAATGAGTCACAAAATTCGTGATTTGATTAATG
GTCGTTATACTGATGATATTAATAGCAAAGCAGACATTGAACTCATTGACCTATCAGAACAACTTAACGACCTATCAGAT
GTTTTTCGCCTCACCCATGAAAATTTAGCCCAGGAGAAGAATCGTCTGGCTAGCATTTTGGCATATATGAGTGATGGTGT
TTTAGCGACTGACCGAACTGGTCAGATTATGATGATTAATGAAACAGCACAAAAACAGATGAATATCAGTCGTGAGGAGG
CCCTCACAAAGAATATAACTGATCTTTTGGGGAGTGAATCCCCTTATACTTATAGAGAATTAGTGTCTCAAACACCAATT
GTTACCATAAATCGGCGTGATGAGACAGGTGAATTTATCACATTGCGCTTGCGCTTCGCATTGAATAGACGTGAAAGTGG
CTTTATTTCAGGTTTGGTTGTCGTATTGCACGACACCACTGAACAAGAAAAAGAAGAAAGAGAGCGTCGTCTGTTTGTTT
CCAATGTTAGTCATGAGTTAAGAACTCCTTTGACTTCGGTTAAATCTTATCTAGAAGCACTTGATGAAGGAGCTTTAAAA
GAGGATATTGCTCCAAGTTTTATTAAAGTTTCACTTGATGAAACTAATCGAATGATGCGGATGATTTCTGATCTTTTGAA
TCTATCACGAATAGATAATCAAGTGACAGCGCTAGCTGTTGAAATGACTAATTTTACAGCTTTTATGACCTCGATCTTAA
ATCGCTTCGATTTGGTTCGCAATCAAAATACGGTTGCTGGTAAAACATATGAGATAATCCGTGATTATCCTATAAAGTCA
ATTTGGTTAGAAATTGATAATGATAAGATGACCCAGGTCATTGAAAATATTTTAAATAATGCGATTAAATATTCTCCTGA
TGGTGGTAAAATTCGAGTTAAAATGAAAACTACTGATAGCCAGCTAATTATTTCCATTTCTGACCAAGGTTTAGGAATTC
CCAAAAAAGATCTCCCTTTAATTTTCGACCGTTTCTATCGTGTTGATAAAGCACGTAGCCGGGCACAGGGTGGAACAGGG
CTAGGATTAGCTATTGCAAAAGAGATTGTCAAACAACATAAGGGCTTTATTTGGGCTAAAAGTGATTACGGTAAAGGTTC
GACCTTTACAATTGTTCTTCCTTATGACAAAGATGTGATGTCGGATGATGTTGATGAATGGGAGGACGATATTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9Z9V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.705

91.593

0.666

  micB Streptococcus pneumoniae Cp1015

66.118

94.027

0.622


Multiple sequence alignment