Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FGK96_RS06745 Genome accession   NZ_LR594036
Coordinates   1412588..1413400 (-) Length   270 a.a.
NCBI ID   WP_138082493.1    Uniprot ID   -
Organism   Streptococcus porcinus strain NCTC10710     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1407588..1418400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK96_RS06735 (NCTC10710_01397) smc 1408246..1411791 (-) 3546 WP_138082491.1 chromosome segregation protein SMC -
  FGK96_RS06740 (NCTC10710_01398) rnc 1411792..1412484 (-) 693 WP_003085736.1 ribonuclease III -
  FGK96_RS06745 (NCTC10710_01399) vicX 1412588..1413400 (-) 813 WP_138082493.1 MBL fold metallo-hydrolase Regulator
  FGK96_RS06750 (NCTC10710_01400) vicK 1413401..1414759 (-) 1359 WP_138082495.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGK96_RS06755 (NCTC10710_01401) vicR 1414752..1415462 (-) 711 WP_003084933.1 response regulator YycF Regulator
  FGK96_RS06760 (NCTC10710_01402) - 1415723..1416502 (+) 780 WP_138082497.1 amino acid ABC transporter ATP-binding protein -
  FGK96_RS06765 (NCTC10710_01403) - 1416515..1417333 (+) 819 WP_138082499.1 transporter substrate-binding domain-containing protein -
  FGK96_RS06770 (NCTC10710_01404) - 1417351..1418055 (+) 705 WP_138082501.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30428.54 Da        Isoelectric Point: 5.5848

>NTDB_id=1127351 FGK96_RS06745 WP_138082493.1 1412588..1413400(-) (vicX) [Streptococcus porcinus strain NCTC10710]
MLEQEGFKYSILASGSTGNSFYLETPKKRILVDAGLTGKKIISLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARKYHL
DIYANQKTWQIIDDRNMIGKIDTNQKYIFDRDKVMTFGDLDIESFGVSHDAADPQFYRFMKDNKSFVMLTDTGYVSDRMS
GIIDNADAYLIESNHDIEILRSGSYPWSLKQRILSDKGHLSNEDGAGAMIRSIGYKTKKIFLGHLSKENNIKELAHMTME
NQLAMVDLAVGTDFKVYDTSPDSACSLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=1127351 FGK96_RS06745 WP_138082493.1 1412588..1413400(-) (vicX) [Streptococcus porcinus strain NCTC10710]
ATGCTAGAGCAAGAAGGATTTAAATATAGTATTTTAGCATCGGGGTCTACTGGTAATAGTTTCTATTTAGAAACCCCTAA
AAAACGCATACTTGTTGATGCGGGATTGACTGGTAAAAAAATTATCAGTCTCTTAGCAGAAATAGATCGGAAGCCAGAAG
ATTTAGATGCTATATTAATTACACATGAACATTCTGATCATATAAAAGGAGTCGGTGTTCTTGCTCGTAAGTATCATCTT
GATATTTATGCTAACCAAAAAACGTGGCAGATTATTGATGATAGAAATATGATTGGAAAAATTGATACTAACCAAAAATA
TATTTTTGACCGTGATAAGGTCATGACGTTTGGAGACCTTGATATTGAAAGTTTTGGTGTCAGTCATGATGCGGCAGATC
CTCAATTTTACCGGTTTATGAAAGATAATAAATCATTCGTTATGTTAACAGATACTGGGTATGTGAGTGATCGTATGTCT
GGTATTATTGATAATGCAGATGCTTATTTGATTGAATCAAATCATGATATTGAGATTTTAAGATCCGGATCTTATCCATG
GAGTTTAAAACAGCGGATTTTATCTGATAAGGGCCACTTGTCAAATGAAGATGGTGCTGGTGCAATGATTCGCAGTATAG
GTTATAAGACTAAGAAAATTTTCCTTGGGCACTTGAGTAAGGAAAATAATATAAAAGAATTAGCTCATATGACAATGGAA
AATCAATTAGCGATGGTGGATTTAGCAGTAGGAACTGACTTTAAAGTATATGATACATCGCCAGATAGTGCTTGTTCCTT
AACAGATATATAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(16-224)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

99.63

0.748

Multiple sequence alignment