Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | FGK96_RS00665 | Genome accession | NZ_LR594036 |
| Coordinates | 107796..108752 (+) | Length | 318 a.a. |
| NCBI ID | WP_138080444.1 | Uniprot ID | - |
| Organism | Streptococcus porcinus strain NCTC10710 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 102796..113752
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGK96_RS00625 (NCTC10710_00134) | - | 103622..103987 (+) | 366 | WP_138080436.1 | DUF1033 family protein | - |
| FGK96_RS00630 (NCTC10710_00135) | comYA | 104068..105009 (+) | 942 | WP_138080438.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FGK96_RS00635 (NCTC10710_00136) | comYB | 104891..105976 (+) | 1086 | WP_269472105.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| FGK96_RS00640 (NCTC10710_00137) | comYC | 105976..106302 (+) | 327 | WP_003083111.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FGK96_RS00645 (NCTC10710_00138) | comGD | 106349..106690 (+) | 342 | WP_258558001.1 | competence type IV pilus minor pilin ComGD | - |
| FGK96_RS00650 (NCTC10710_00139) | comGE | 106662..106955 (+) | 294 | WP_172601572.1 | competence type IV pilus minor pilin ComGE | - |
| FGK96_RS00655 (NCTC10710_00140) | comGF | 106915..107376 (+) | 462 | WP_138080440.1 | competence type IV pilus minor pilin ComGF | - |
| FGK96_RS00660 (NCTC10710_00141) | comGG | 107354..107737 (+) | 384 | WP_138080442.1 | competence type IV pilus minor pilin ComGG | - |
| FGK96_RS00665 (NCTC10710_00142) | comYH | 107796..108752 (+) | 957 | WP_138080444.1 | class I SAM-dependent methyltransferase | Machinery gene |
| FGK96_RS00670 (NCTC10710_00143) | - | 108808..110001 (+) | 1194 | WP_138080446.1 | acetate kinase | - |
| FGK96_RS00675 (NCTC10710_00144) | - | 110267..110476 (+) | 210 | WP_093959144.1 | helix-turn-helix transcriptional regulator | - |
| FGK96_RS00680 (NCTC10710_00145) | - | 110473..110925 (+) | 453 | WP_138080448.1 | hypothetical protein | - |
| FGK96_RS00685 (NCTC10710_00146) | - | 110937..111584 (+) | 648 | WP_138080450.1 | CPBP family intramembrane glutamic endopeptidase | - |
| FGK96_RS00690 (NCTC10710_00147) | proC | 111621..112391 (-) | 771 | WP_138080452.1 | pyrroline-5-carboxylate reductase | - |
| FGK96_RS00695 (NCTC10710_00148) | pepA | 112409..113476 (-) | 1068 | WP_138080454.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 36086.04 Da Isoelectric Point: 4.6592
>NTDB_id=1127333 FGK96_RS00665 WP_138080444.1 107796..108752(+) (comYH) [Streptococcus porcinus strain NCTC10710]
MNFEKIEKAYELILENSQLIENEIKTHIYDALIEQNAYYLGADGASEQVLKNNGDLYALNLSKEEWRRAFQFIFIKAGQT
EKLQANHQFTPDSIAFIMLFLMEQLHGGDSLDVIEIGSGTGNLAQTLLNNSLKKIDYLGLELDDLLIDLSASIAEVMKSS
ATFLQEDAVRPQVLKESDIIISDLPVGYYPNDEIASRYQVVSAEGHTYAHHLLMEQSLKYLKKNGFAIFLAPSNLLNSSQ
SDLLKKWLKDYAQLRVVLTLPDSLFGNQANAKSIIVLQKNTEKNGETFVYPLTDLQSPQTVQRFMEEFKKWKQDNVFS
MNFEKIEKAYELILENSQLIENEIKTHIYDALIEQNAYYLGADGASEQVLKNNGDLYALNLSKEEWRRAFQFIFIKAGQT
EKLQANHQFTPDSIAFIMLFLMEQLHGGDSLDVIEIGSGTGNLAQTLLNNSLKKIDYLGLELDDLLIDLSASIAEVMKSS
ATFLQEDAVRPQVLKESDIIISDLPVGYYPNDEIASRYQVVSAEGHTYAHHLLMEQSLKYLKKNGFAIFLAPSNLLNSSQ
SDLLKKWLKDYAQLRVVLTLPDSLFGNQANAKSIIVLQKNTEKNGETFVYPLTDLQSPQTVQRFMEEFKKWKQDNVFS
Nucleotide
Download Length: 957 bp
>NTDB_id=1127333 FGK96_RS00665 WP_138080444.1 107796..108752(+) (comYH) [Streptococcus porcinus strain NCTC10710]
ATGAACTTTGAAAAAATTGAGAAAGCCTATGAGCTTATTTTGGAGAACAGTCAGCTCATTGAAAATGAGATTAAGACGCA
TATTTATGATGCTTTAATTGAGCAGAATGCCTATTATTTAGGAGCTGATGGAGCAAGTGAACAGGTCTTAAAAAATAATG
GTGACTTATATGCTTTAAATCTGAGTAAGGAAGAGTGGCGTCGCGCCTTTCAGTTTATTTTTATAAAAGCAGGCCAGACG
GAAAAATTACAAGCAAATCACCAATTTACCCCAGACAGTATTGCTTTTATCATGCTTTTTTTGATGGAGCAGTTGCATGG
TGGAGATAGTTTGGATGTGATTGAGATTGGTAGTGGGACAGGGAATCTTGCTCAGACACTACTAAATAACAGTCTTAAGA
AAATTGACTACTTGGGTTTGGAGTTAGATGATTTATTGATTGATTTGTCGGCCAGTATCGCTGAGGTCATGAAATCCTCT
GCAACTTTTCTTCAAGAAGATGCTGTTCGCCCGCAAGTACTAAAAGAAAGTGATATTATTATTAGTGATTTACCTGTTGG
TTATTATCCTAATGATGAGATTGCAAGTCGCTATCAGGTGGTCAGTGCTGAAGGCCATACTTATGCTCATCATTTATTGA
TGGAGCAATCATTAAAGTATCTCAAAAAGAATGGTTTTGCGATTTTCTTAGCGCCAAGCAATCTCTTAAACAGTTCTCAA
AGTGATTTGTTGAAAAAATGGCTAAAAGATTATGCTCAGCTCAGAGTAGTCCTAACCCTACCAGACTCTCTTTTTGGCAA
TCAAGCAAATGCAAAATCCATTATTGTCCTACAAAAGAACACTGAAAAAAATGGAGAAACTTTTGTTTACCCACTGACTG
ATTTACAATCACCACAGACGGTTCAAAGGTTCATGGAAGAATTCAAAAAATGGAAACAAGATAATGTTTTTTCATAA
ATGAACTTTGAAAAAATTGAGAAAGCCTATGAGCTTATTTTGGAGAACAGTCAGCTCATTGAAAATGAGATTAAGACGCA
TATTTATGATGCTTTAATTGAGCAGAATGCCTATTATTTAGGAGCTGATGGAGCAAGTGAACAGGTCTTAAAAAATAATG
GTGACTTATATGCTTTAAATCTGAGTAAGGAAGAGTGGCGTCGCGCCTTTCAGTTTATTTTTATAAAAGCAGGCCAGACG
GAAAAATTACAAGCAAATCACCAATTTACCCCAGACAGTATTGCTTTTATCATGCTTTTTTTGATGGAGCAGTTGCATGG
TGGAGATAGTTTGGATGTGATTGAGATTGGTAGTGGGACAGGGAATCTTGCTCAGACACTACTAAATAACAGTCTTAAGA
AAATTGACTACTTGGGTTTGGAGTTAGATGATTTATTGATTGATTTGTCGGCCAGTATCGCTGAGGTCATGAAATCCTCT
GCAACTTTTCTTCAAGAAGATGCTGTTCGCCCGCAAGTACTAAAAGAAAGTGATATTATTATTAGTGATTTACCTGTTGG
TTATTATCCTAATGATGAGATTGCAAGTCGCTATCAGGTGGTCAGTGCTGAAGGCCATACTTATGCTCATCATTTATTGA
TGGAGCAATCATTAAAGTATCTCAAAAAGAATGGTTTTGCGATTTTCTTAGCGCCAAGCAATCTCTTAAACAGTTCTCAA
AGTGATTTGTTGAAAAAATGGCTAAAAGATTATGCTCAGCTCAGAGTAGTCCTAACCCTACCAGACTCTCTTTTTGGCAA
TCAAGCAAATGCAAAATCCATTATTGTCCTACAAAAGAACACTGAAAAAAATGGAGAAACTTTTGTTTACCCACTGACTG
ATTTACAATCACCACAGACGGTTCAAAGGTTCATGGAAGAATTCAAAAAATGGAAACAAGATAATGTTTTTTCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
66.562 |
99.686 |
0.664 |
| comYH | Streptococcus mutans UA140 |
66.246 |
99.686 |
0.66 |