Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FGK95_RS08715 | Genome accession | NZ_LR590625 |
| Coordinates | 1742281..1742772 (-) | Length | 163 a.a. |
| NCBI ID | WP_003045179.1 | Uniprot ID | - |
| Organism | Streptococcus canis strain B700072 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1737281..1747772
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGK95_RS08700 (SAMEA5186854_01755) | - | 1739738..1740682 (+) | 945 | WP_003045175.1 | magnesium transporter CorA family protein | - |
| FGK95_RS08705 (SAMEA5186854_01756) | - | 1740794..1741453 (+) | 660 | WP_093998840.1 | DUF1129 domain-containing protein | - |
| FGK95_RS08710 (SAMEA5186854_01757) | rpsR | 1741924..1742163 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| FGK95_RS08715 (SAMEA5186854_01758) | ssb | 1742281..1742772 (-) | 492 | WP_003045179.1 | single-stranded DNA-binding protein | Machinery gene |
| FGK95_RS08720 (SAMEA5186854_01759) | rpsF | 1742794..1743084 (-) | 291 | WP_003045181.1 | 30S ribosomal protein S6 | - |
| FGK95_RS10885 (SAMEA5186854_01760) | - | 1744124..1744417 (-) | 294 | WP_093998844.1 | hypothetical protein | - |
| FGK95_RS08730 (SAMEA5186854_01761) | mutY | 1744588..1745751 (+) | 1164 | WP_138114298.1 | A/G-specific adenine glycosylase | - |
| FGK95_RS08735 (SAMEA5186854_01762) | trxA | 1745848..1746162 (-) | 315 | WP_003045187.1 | thioredoxin | - |
| FGK95_RS08740 (SAMEA5186854_01763) | - | 1746389..1747708 (+) | 1320 | WP_093998841.1 | FAD-containing oxidoreductase | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17961.77 Da Isoelectric Point: 4.8894
>NTDB_id=1127125 FGK95_RS08715 WP_003045179.1 1742281..1742772(-) (ssb) [Streptococcus canis strain B700072]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRNFKSQNGEREADFISCVIWRQPAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNAPSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRNFKSQNGEREADFISCVIWRQPAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNAPSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1127125 FGK95_RS08715 WP_003045179.1 1742281..1742772(-) (ssb) [Streptococcus canis strain B700072]
ATGATTAACAATGTAGTACTAGTTGGTCGCATGACCAAGGATGCAGAACTTCGTTACACGCCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTAACTTTAAAAGCCAAAATGGTGAGCGCGAGGCAGATTTCATTAGCTGTGTTATCT
GGCGTCAGCCAGCTGAAAACTTAGCAAACTGGGCTAAAAAAGGTGCCTTAATCGGAATTACAGGTCGTATTCAGACCCGT
AATTACGAAAACCAACAAGGGCAACGTGTCTATGTGACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGATCATTTAATGGTGGTTTTAACAACAATGCCCCATCATCAAACAGTTACTCAGCAC
CTGCACAACAAACACCTAACTTTGGAAGAGATGACAGTCCATTTGGTAATTCAAACCCGATGGATATTTCAGATGACGAT
CTTCCATTCTAG
ATGATTAACAATGTAGTACTAGTTGGTCGCATGACCAAGGATGCAGAACTTCGTTACACGCCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTAACTTTAAAAGCCAAAATGGTGAGCGCGAGGCAGATTTCATTAGCTGTGTTATCT
GGCGTCAGCCAGCTGAAAACTTAGCAAACTGGGCTAAAAAAGGTGCCTTAATCGGAATTACAGGTCGTATTCAGACCCGT
AATTACGAAAACCAACAAGGGCAACGTGTCTATGTGACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGATCATTTAATGGTGGTTTTAACAACAATGCCCCATCATCAAACAGTTACTCAGCAC
CTGCACAACAAACACCTAACTTTGGAAGAGATGACAGTCCATTTGGTAATTCAAACCCGATGGATATTTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.14 |
100 |
0.614 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.471 |
100 |
0.613 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
55.66 |
65.031 |
0.362 |
| ssb | Vibrio cholerae strain A1552 |
33.333 |
100 |
0.362 |