Detailed information NTG1126551

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: E0F34_RS04770
• Genome accession: NZ_LR536843
• Coordinates: 876929..877882 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495900.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 871929..882882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0F34_RS04745	rpmG	872672..872821 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
E0F34_RS04750 (SAMEA104035599_00899)	secG	872861..873094 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
E0F34_RS04755 (SAMEA104035599_00900)	rnr	873196..875550 (+)	2355	WP_061384509.1	ribonuclease R	-
E0F34_RS04760 (SAMEA104035599_00901)	smpB	875513..875980 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
E0F34_RS04765 (SAMEA104035599_00902)	tehB	875996..876856 (+)	861	WP_000413762.1	SAM-dependent methyltransferase TehB	-
E0F34_RS04770 (SAMEA104035599_00903)	coiA	876929..877882 (+)	954	WP_000495900.1	competence protein CoiA	Machinery gene
E0F34_RS04775 (SAMEA104035599_00904)	pepF	877901..879703 (+)	1803	WP_000244142.1	oligoendopeptidase F	Regulator
E0F34_RS04780 (SAMEA104035599_00905)	-	879705..880418 (+)	714	WP_000230399.1	O-methyltransferase	-
E0F34_RS04785 (SAMEA104035599_00906)	prsA	880485..881426 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
E0F34_RS04790 (SAMEA104035599_00907)	-	881543..881884 (-)	342	Protein_907	transposase	-
E0F34_RS04800	-	882297..882392 (+)	96	Protein_908	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=1126551 E0F34_RS04770 WP_000495900.1 876929..877882(+) (coiA) [Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=1126551 E0F34_RS04770 WP_000495900.1 876929..877882(+) (coiA) [Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432