Detailed information NTG1126337

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: E0F40_RS04780
• Genome accession: NZ_LR216065
• Coordinates: 887827..888780 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495900.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain GPSC18 substr. ST13 isolate 55896440-41bd-11e5-998e-3c4a9275d6c6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 882827..893780

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0F40_RS04755	rpmG	883570..883719 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
E0F40_RS04760 (SAMEA3714487_00899)	secG	883759..883992 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
E0F40_RS04765 (SAMEA3714487_00900)	rnr	884094..886448 (+)	2355	WP_000654917.1	ribonuclease R	-
E0F40_RS04770 (SAMEA3714487_00901)	smpB	886411..886878 (+)	468	WP_001051747.1	SsrA-binding protein SmpB	-
E0F40_RS04775 (SAMEA3714487_00902)	tehB	886894..887754 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
E0F40_RS04780 (SAMEA3714487_00903)	coiA	887827..888780 (+)	954	WP_000495900.1	competence protein CoiA	Machinery gene
E0F40_RS04785 (SAMEA3714487_00904)	pepF	888799..890601 (+)	1803	WP_000244118.1	oligoendopeptidase F	Regulator
E0F40_RS04790 (SAMEA3714487_00905)	-	890603..891316 (+)	714	WP_000230399.1	O-methyltransferase	-
E0F40_RS04795 (SAMEA3714487_00906)	prsA	891383..892324 (+)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
E0F40_RS04800 (SAMEA3714487_00907)	-	892443..892784 (-)	342	Protein_914	transposase	-
E0F40_RS04810	-	893197..893292 (+)	96	Protein_915	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=1126337 E0F40_RS04780 WP_000495900.1 887827..888780(+) (coiA) [Streptococcus pneumoniae strain GPSC18 substr. ST13 isolate 55896440-41bd-11e5-998e-3c4a9275d6c6]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=1126337 E0F40_RS04780 WP_000495900.1 887827..888780(+) (coiA) [Streptococcus pneumoniae strain GPSC18 substr. ST13 isolate 55896440-41bd-11e5-998e-3c4a9275d6c6]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432