Detailed information NTG1126308

Bioinformatically predicted

Overview

• Name: comFC/cflB
• Type: Machinery gene
• Locus tag: E0F31_RS10880
• Genome accession: NZ_LR216064
• Coordinates: 2020064..2020726 (-)
• Length: 220 a.a.
• NCBI ID: WP_050206343.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain GPSC13 substr. ST473 isolate 569492b0-41bd-11e5-998e-3c4a9275d6c6
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2015064..2025726

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0F31_RS10855 (SAMEA3714520_02049)	-	2015214..2015480 (-)	267	WP_001278167.1	Veg family protein	-
E0F31_RS10860 (SAMEA3714520_02050)	dnaB	2015482..2016834 (-)	1353	WP_000852486.1	replicative DNA helicase	-
E0F31_RS10865 (SAMEA3714520_02051)	rplI	2016878..2017330 (-)	453	WP_000864220.1	50S ribosomal protein L9	-
E0F31_RS10870 (SAMEA3714520_02052)	-	2017327..2019300 (-)	1974	WP_000715109.1	DHH family phosphoesterase	-
E0F31_RS10875 (SAMEA3714520_02053)	hpf	2019436..2019984 (-)	549	WP_000599104.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
E0F31_RS10880 (SAMEA3714520_02054)	comFC/cflB	2020064..2020726 (-)	663	WP_050206343.1	ComF family protein	Machinery gene
E0F31_RS10885 (SAMEA3714520_02055)	comFA/cflA	2020723..2022021 (-)	1299	WP_050206342.1	DEAD/DEAH box helicase	Machinery gene
E0F31_RS10890 (SAMEA3714520_02056)	-	2022077..2022712 (+)	636	WP_000395739.1	YigZ family protein	-
E0F31_RS10895 (SAMEA3714520_02057)	cysK	2022997..2023923 (+)	927	WP_000029865.1	cysteine synthase A	-
E0F31_RS10900 (SAMEA3714520_02058)	tsf	2024044..2025084 (-)	1041	WP_000808063.1	translation elongation factor Ts	-

Sequence

Protein

• Length: 220 a.a.
• Molecular weight: 25257.10 Da
• Isoelectric Point: 7.3680

>NTDB_id=1126308 E0F31_RS10880 WP_050206343.1 2020064..2020726(-) (comFC/cflB) [Streptococcus pneumoniae strain GPSC13 substr. ST473 isolate 569492b0-41bd-11e5-998e-3c4a9275d6c6]
MKCLLCGQTMKTVLTFSSLLLLRNDDSCLCSDCDSTFERIGEENCPNCMKTELSTKCQDCQLWCKEGVEVSHRAIFTYNQ
AMKDFFSRYKFDGDFLLRKVFASFLSEELKKYKEYQFVVIPLSPDRYANRGFNQVEGLVEAAGFEYLDLLEKREERASSS
KNRSERLGTELPFYIKSGVTIPKKILLIDDIYTTGATINRVKKLLEEAGAKDVKTFSLVR

Nucleotide

• Length: 663 bp

>NTDB_id=1126308 E0F31_RS10880 WP_050206343.1 2020064..2020726(-) (comFC/cflB) [Streptococcus pneumoniae strain GPSC13 substr. ST473 isolate 569492b0-41bd-11e5-998e-3c4a9275d6c6]
ATGAAGTGCTTGTTATGTGGGCAGACTATGAAGACTGTTTTAACTTTTAGTAGTCTCTTACTTCTGAGGAATGATGACTC
TTGTCTTTGTTCAGACTGTGATTCTACTTTTGAAAGAATTGGGGAAGAGAACTGTCCAAATTGTATGAAAACAGAGTTGT
CAACAAAGTGTCAAGATTGTCAACTTTGGTGTAAAGAAGGAGTTGAAGTCAGTCATAGAGCGATTTTTACTTACAATCAA
GCTATGAAGGATTTTTTCAGTCGGTATAAGTTTGATGGAGACTTCCTGTTAAGAAAAGTTTTCGCTTCATTTTTAAGTGA
GGAGTTGAAAAAGTACAAAGAGTATCAATTTGTTGTAATTCCCCTAAGTCCTGATAGATATGCTAACAGAGGATTTAATC
AGGTTGAGGGCTTGGTAGAGGCAGCAGGCTTTGAGTATCTGGATTTATTAGAGAAAAGAGAAGAGAGAGCCAGTTCTTCT
AAAAATCGTTCAGAGCGCTTGGGGACAGAACTTCCTTTCTATATTAAAAGTGGAGTCACTATTCCTAAAAAAATCCTACT
TATAGATGATATCTATACTACAGGAGCAACTATAAATCGTGTTAAGAAACTGTTGGAAGAAGCCGGTGCTAAGGATGTAA
AAACATTTTCCCTTGTAAGATGA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (157-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC/cflB	Streptococcus pneumoniae TIGR4	99.545	100	0.995
comFC/cflB	Streptococcus pneumoniae Rx1	99.091	100	0.991
comFC/cflB	Streptococcus pneumoniae D39	99.091	100	0.991
comFC/cflB	Streptococcus pneumoniae R6	99.091	100	0.991
comFC/cflB	Streptococcus mitis NCTC 12261	91.364	100	0.914
comFC/cflB	Streptococcus mitis SK321	90.909	100	0.909